Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC092868.3-201ENST00000560515 784 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC110760.3-201ENST00000598794 467 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC002487.1-201ENST00000604565 994 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 LSM1P2-201ENST00000604911 322 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC018695.5-201ENST00000605872 315 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC122108.2-201ENST00000611946 526 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 TCP1P3-201ENST00000414406 1498 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
ZNF549Q6P9A3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 CASC19-255ENST00000641733 1385 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC017079.1-201ENST00000333650 415 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SNORA2.3-201ENST00000383920 135 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC013442.1-201ENST00000397347 228 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 GAPDHP15-201ENST00000398586 975 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 PTP4A1P7-201ENST00000423476 514 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SETP9-201ENST00000423837 832 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MTCO1P45-201ENST00000431457 267 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MTCO1P53-201ENST00000441633 699 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SETP6-201ENST00000479329 568 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ATP5LP3-201ENST00000514223 304 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC091163.3-201ENST00000518269 1144 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC024940.3-201ENST00000538551 316 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 OR11J2P-201ENST00000555298 907 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 PCNAP1-202ENST00000595299 752 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC113368.1-201ENST00000603736 382 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AL049844.2-201ENST00000604280 628 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 OR51C1P-201ENST00000608504 942 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC021755.4-201ENST00000616620 456 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC120338.1-201ENST00000625074 1541 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZNF549Q6P9A3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AL513185.3-201ENST00000433335 1300 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MAPK10-338ENST00000641647 3362 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MIR16-2-201ENST00000362117 81 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 RPL5P19-201ENST00000404228 893 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AL391361.1-201ENST00000405580 489 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AL355615.1-201ENST00000406187 641 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 Z86062.1-201ENST00000406773 777 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC096644.3-201ENST00000416788 338 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms