Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 MTND5P16-201ENST00000460269 1703 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 RNU1-134P-201ENST00000362935 165 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 RNU6-878P-201ENST00000384578 110 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 GSTA9P-201ENST00000406231 611 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 USP9YP13-201ENST00000417797 480 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 NANOGP4-201ENST00000427230 913 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 MTCO3P21-201ENST00000430791 643 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 TAAR7P-201ENST00000436141 242 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC002542.1-201ENST00000440683 193 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ACA64.1-201ENST00000459171 127 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 EIF3LP3-201ENST00000495197 822 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 RNA5SP434-201ENST00000516647 121 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 IGHV3-57-201ENST00000520143 280 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC013701.1-201ENST00000522657 465 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 OR4C2P-201ENST00000530855 1064 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AL359212.1-201ENST00000556608 614 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC010680.4-201ENST00000605334 543 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AL136295.6-201ENST00000610486 658 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 RFPL4AP6-201ENST00000616792 846 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 TMEM75-201ENST00000624314 2165 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 OR52B5P-204ENST00000641744 3467 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC062022.1-201ENST00000451026 1684 ntBASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.05□□□□□ -1.12
RC3H1Q5TC82 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 RNA5SP27-201ENST00000363839 119 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 RNA5SP242-201ENST00000364171 118 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 RNU6-1160P-201ENST00000384546 104 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 RSU1P3-201ENST00000412878 835 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.04□□□□□ -1.12
RC3H1Q5TC82 BX510359.3-201ENST00000422168 306 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 USP9YP36-201ENST00000424581 829 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 AC092170.1-201ENST00000440211 356 ntBASIC8.04□□□□□ -1.12
RC3H1Q5TC82 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms