Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 SNORA48.10-201ENST00000516965 160 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 ELOCP28-201ENST00000590044 317 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC104785.1-201ENST00000603220 588 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC005084.1-201ENST00000605160 304 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 RPL12P48-201ENST00000605620 304 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 MIR6820-201ENST00000611508 62 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC013476.2-201ENST00000614456 459 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 AC093278.2-201ENST00000564956 2485 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 CASC19-248ENST00000641674 1356 ntBASIC7.33□□□□□ -1.24
TMEM88BA6NKF7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL161901.1-201ENST00000624954 3425 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL136133.1-201ENST00000413694 376 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 BMS1P17-202ENST00000416720 316 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC073335.1-201ENST00000427776 363 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 MTND3P21-201ENST00000433774 331 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL772161.1-201ENST00000439130 476 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC011225.1-201ENST00000457751 369 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 RPL23AP64-201ENST00000469465 435 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 OR2AO1P-201ENST00000476497 403 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 HMGN2P25-201ENST00000486956 268 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC004453.1-201ENST00000487895 408 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SEPT7P9-203ENST00000604116 343 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL136131.3-201ENST00000607600 188 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC006566.1-201ENST00000608943 513 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 MIR6810-201ENST00000622701 70 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC231657.1-201ENST00000624313 397 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 MFSD8-219ENST00000641228 2559 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AC022325.1-201ENST00000502748 2199 ntBASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.32□□□□□ -1.24
TMEM88BA6NKF7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 RNU1-49P-201ENST00000363468 159 ntBASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 RN7SKP124-201ENST00000364730 341 ntBASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TMEM88BA6NKF7 SNORA56-201ENST00000383966 129 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms