Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AP000542.2-201ENST00000623199 6179 ntBASIC4.51□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 DHX9P1-201ENST00000436565 3076 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SOCS5P3-201ENST00000425115 1576 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RLIMP2-201ENST00000427891 1563 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNA5SP132-201ENST00000364725 118 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SNORA66-201ENST00000384792 133 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 U3.35-201ENST00000408405 208 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNA5SP178-201ENST00000410380 128 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL513325.1-201ENST00000417716 1034 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL160175.1-201ENST00000428124 247 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 PTP4A1P3-201ENST00000433661 420 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNFT1P2-201ENST00000443064 757 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 KNOP1P3-201ENST00000446933 426 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 HMGB1P5-202ENST00000451497 985 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC092647.2-201ENST00000452998 253 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 PSMC1P13-201ENST00000458195 985 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC023141.9-201ENST00000458734 412 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RN7SL717P-201ENST00000478343 297 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC037198.2-201ENST00000478845 733 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SYT14P1-201ENST00000481459 721 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC116562.1-201ENST00000485355 781 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 MTATP6P1-201ENST00000514057 681 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNA5SP362-201ENST00000516048 118 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 UBTFL9-201ENST00000534504 1148 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL049779.2-201ENST00000553847 315 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC095055.1-201ENST00000603472 1113 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC087783.2-201ENST00000605070 562 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC005377.1-201ENST00000605126 456 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC144521.1-201ENST00000607148 956 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC079395.2-201ENST00000610982 737 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC015804.1-201ENST00000622935 435 ntBASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SSXP3-201ENST00000442971 1300 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC097461.1-201ENST00000568928 2821 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SNORA63.3-201ENST00000362682 132 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNU6-252P-201ENST00000363232 107 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RNU1-83P-201ENST00000363426 164 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL357515.1-201ENST00000402967 542 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC092570.3-201ENST00000420113 693 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 E2F6P2-201ENST00000420708 748 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL512661.1-201ENST00000434586 1253 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL158053.1-201ENST00000441503 453 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RPL34P20-201ENST00000442771 351 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 RPS21P4-201ENST00000487122 248 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 CDH12P2-201ENST00000504393 298 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC016550.1-201ENST00000505348 785 ntBASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.49□□□□□ -1.69
TRBV4-1A0A0J9YWV2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms