Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AL449283.1-201ENST00000602631 3403 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 MAPK10-290ENST00000641237 2826 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC008555.1-201ENST00000561778 2757 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 Y_RNA.100-201ENST00000363141 102 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 RPL7P25-201ENST00000404151 721 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 MIR1305-201ENST00000408300 86 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 MIR548I2-201ENST00000408348 149 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 RPL31P12-201ENST00000422587 358 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC005017.1-201ENST00000482002 490 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC008496.1-201ENST00000509131 295 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 HSD3BP3-201ENST00000514706 994 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC109635.4-202ENST00000531666 412 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 MIR4470-201ENST00000583453 72 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 RPL26P30-202ENST00000602923 645 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC004908.1-201ENST00000606572 541 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 U2.1-201ENST00000618978 145 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 AC005858.3-201ENST00000624756 589 ntBASIC7.86□□□□□ -1.15
LRCH3Q96II8 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
LRCH3Q96II8 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LRCH3Q96II8 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC013488.1-201ENST00000526618 1838 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC105046.1-201ENST00000566457 4997 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 MTND5P28-201ENST00000438005 1594 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AF287957.1-201ENST00000607368 1595 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
LRCH3Q96II8 Y_RNA.5-201ENST00000362334 102 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RNU6-582P-201ENST00000362989 107 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 Y_RNA.255-201ENST00000364581 97 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RN7SKP55-201ENST00000364888 307 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 Y_RNA.447-201ENST00000384184 113 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RNU6-452P-201ENST00000384406 107 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RNA5SP23-201ENST00000391006 105 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 MRPL42P2-201ENST00000403169 426 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 MIR548F5-201ENST00000408421 86 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 RPL6P29-201ENST00000414863 865 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 AL356968.1-201ENST00000416622 474 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC127526.1-201ENST00000417526 366 ntBASIC7.85□□□□□ -1.15
LRCH3Q96II8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.85□□□□□ -1.15
LRCH3Q96II8 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms