Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 AC107068.1-201ENST00000563286 4218 ntBASIC4.54□□□□□ -1.68
CCDC107Q8WV48 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 HSPD1P11-201ENST00000508643 1702 ntBASIC4.54□□□□□ -1.68
CCDC107Q8WV48 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 AC083843.3-201ENST00000623679 2186 ntBASIC4.54□□□□□ -1.68
CCDC107Q8WV48 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 GTF2H2B-203ENST00000508065 1432 ntBASIC4.54□□□□□ -1.68
CCDC107Q8WV48 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC107Q8WV48 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 RNA5SP510-201ENST00000364697 99 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 RNU4-2-201ENST00000365668 141 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC013442.1-201ENST00000397347 228 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC233289.1-201ENST00000403700 508 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 GAPDHP42-201ENST00000406848 981 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 UBE2V1P11-201ENST00000411559 285 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 VTA1P1-201ENST00000414044 866 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 OR6E1P-201ENST00000414424 923 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 OR13Z1P-201ENST00000416141 834 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 DEFB130D-201ENST00000426866 237 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 FMO7P-201ENST00000436045 768 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 GAPDHP58-201ENST00000438477 1006 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 MED6P1-201ENST00000439659 713 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 RPL6P5-201ENST00000445678 828 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 MRPL35P2-201ENST00000448009 511 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 HMGB1P4-201ENST00000455362 567 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC110749.1-201ENST00000462007 357 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AP000942.1-201ENST00000463969 747 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 NDUFA5P5-201ENST00000468361 342 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC092754.1-201ENST00000472975 479 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 RPL15P21-201ENST00000495592 567 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 MTND6P2-201ENST00000512226 524 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 MTATP6P9-201ENST00000515039 680 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 NANOGNBP2-201ENST00000544753 553 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC025260.1-201ENST00000548858 430 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 OR11H3P-201ENST00000554547 982 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC124283.4-201ENST00000581815 456 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC011492.1-201ENST00000600023 315 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC009027.1-201ENST00000604510 479 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC108865.2-201ENST00000606881 432 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC055764.2-201ENST00000610089 670 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 uc_338.9-201ENST00000617424 182 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AP003476.1-201ENST00000623984 516 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC135068.5-201ENST00000624197 983 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC004808.1-201ENST00000627671 721 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 AC132825.7-201ENST00000638744 335 ntBASIC4.53□□□□□ -1.68
CCDC107Q8WV48 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC107Q8WV48 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC107Q8WV48 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC107Q8WV48 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC107Q8WV48 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC107Q8WV48 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms