Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPL7P6-201ENST00000480903 738 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 CR383656.1-201ENST00000484916 377 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 MRPS35P3-201ENST00000603189 709 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 TUSC7.1-201ENST00000610969 165 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC092106.3-201ENST00000611308 722 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AL035661.1-201ENST00000620459 1144 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AL157770.1-201ENST00000623049 439 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 ASNSP1-204ENST00000641977 1664 ntBASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC144BQ3MJ40 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RPS4XP5-201ENST00000419038 768 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 MOB1AP1-201ENST00000430903 535 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC099670.2-201ENST00000435130 321 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 HMGB1P48-201ENST00000446155 598 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RN7SL352P-201ENST00000466002 277 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RPL35AP19-201ENST00000469425 329 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 SNRPCP3-201ENST00000474888 476 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RPS17P15-201ENST00000475609 349 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC099521.1-201ENST00000482557 334 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RNU5A-4P-201ENST00000516588 111 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RN7SKP283-201ENST00000517197 270 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 IGLV2-28-201ENST00000520681 304 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 SUMO2P15-201ENST00000604285 278 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AL392112.1-201ENST00000605115 829 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AP005137.2-201ENST00000609238 400 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 uc_338.26-201ENST00000612659 160 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC243654.2-201ENST00000612843 443 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AL355974.3-201ENST00000617383 467 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 RNA5SP439-201ENST00000617595 124 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 CU639417.4-201ENST00000623928 207 ntBASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC144BQ3MJ40 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC119744.1-201ENST00000454746 1715 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms