Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC011447.7-201ENST00000624228 1590 ntBASIC6.12□□□□□ -1.43
COL16A1Q07092 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 SNORA73.2-201ENST00000364946 201 ntBASIC6.12□□□□□ -1.43
COL16A1Q07092 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC138761.5-201ENST00000433967 325 ntBASIC6.12□□□□□ -1.43
COL16A1Q07092 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 RPL23AP43-201ENST00000446445 471 ntBASIC6.12□□□□□ -1.43
COL16A1Q07092 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.12□□□□□ -1.43
COL16A1Q07092 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
COL16A1Q07092 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.12□□□□□ -1.43
COL16A1Q07092 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL16A1Q07092 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL16A1Q07092 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.12□□□□□ -1.43
COL16A1Q07092 U3.35-201ENST00000408405 208 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 AL590806.1-201ENST00000415818 853 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 AL158827.1-201ENST00000416300 391 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 AC105233.3-201ENST00000531125 744 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL16A1Q07092 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.11□□□□□ -1.43
COL16A1Q07092 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.11□□□□□ -1.43
COL16A1Q07092 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.11□□□□□ -1.43
COL16A1Q07092 AC112230.1-201ENST00000604342 547 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.11□□□□□ -1.43
COL16A1Q07092 AL592182.3-201ENST00000642132 3304 ntBASIC6.11□□□□□ -1.43
COL16A1Q07092 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.11□□□□□ -1.43
COL16A1Q07092 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL16A1Q07092 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.11□□□□□ -1.43
COL16A1Q07092 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL16A1Q07092 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL16A1Q07092 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL16A1Q07092 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.11□□□□□ -1.43
COL16A1Q07092 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL16A1Q07092 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AC026403.1-201ENST00000518938 295 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AC040958.1-201ENST00000561102 201 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL16A1Q07092 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 CASC19-243ENST00000641588 1546 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 NOL8P1-201ENST00000508336 3529 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 RLIMP1-201ENST00000339626 1680 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 LINC00622-201ENST00000562811 1570 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL16A1Q07092 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AL035696.2-201ENST00000407941 709 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 NPM1P26-201ENST00000426339 738 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 CDY14P-201ENST00000431260 1014 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AC092162.1-201ENST00000432828 434 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.1□□□□□ -1.43
COL16A1Q07092 CDY12P-201ENST00000440679 1015 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 CDY13P-201ENST00000445813 1015 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.1□□□□□ -1.43
COL16A1Q07092 CDY23P-201ENST00000451661 1014 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.1□□□□□ -1.43
COL16A1Q07092 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL16A1Q07092 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.1□□□□□ -1.43
COL16A1Q07092 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.1□□□□□ -1.43
COL16A1Q07092 AL161729.3-201ENST00000603533 673 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AC099669.2-201ENST00000616549 437 ntBASIC6.1□□□□□ -1.43
COL16A1Q07092 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms