Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC063976.2-201ENST00000425667 3556 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 SNORA64.1-201ENST00000362600 132 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RN7SKP187-201ENST00000365536 330 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RNU6-98P-201ENST00000384173 107 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 RMRPP5-201ENST00000411156 267 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 TCEA1P2-201ENST00000420496 906 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC099336.2-201ENST00000422457 254 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 GAPDHP58-201ENST00000438477 1006 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 CBX1P4-201ENST00000439415 457 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC004854.1-201ENST00000440356 349 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 ARL5AP2-201ENST00000444698 533 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC099560.2-201ENST00000457554 255 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RPL7P41-201ENST00000485823 957 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RN7SL814P-201ENST00000487715 300 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC008427.1-201ENST00000503102 655 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC090568.1-201ENST00000509499 856 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.35□□□□□ -1.71
NKX2-1P43699 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC011840.5-201ENST00000582125 771 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RN7SL356P-201ENST00000582228 248 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC012254.4-201ENST00000588843 273 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC011492.1-201ENST00000600023 315 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC124856.1-201ENST00000600819 896 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AP002906.1-201ENST00000603405 233 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC006946.3-201ENST00000609791 756 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 MIR6780B-201ENST00000610307 79 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC024595.1-201ENST00000623088 387 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC073593.1-201ENST00000624500 411 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-1P43699 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC006927.2-201ENST00000639256 389 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AC013437.2-201ENST00000639587 677 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 AL672167.1-204ENST00000641875 3017 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 AL627171.1-201ENST00000618845 1308 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX2-1P43699 IFIT1P1-201ENST00000400497 1449 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX2-1P43699 AC023421.1-201ENST00000590535 1785 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.34□□□□□ -1.71
NKX2-1P43699 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.34□□□□□ -1.71
NKX2-1P43699 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 NEAT1-202ENST00000501122 22743 ntBASIC4.34□□□□□ -1.71
NKX2-1P43699 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.34□□□□□ -1.71
NKX2-1P43699 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 RNA5SP223-201ENST00000365174 120 ntBASIC4.34□□□□□ -1.71
NKX2-1P43699 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-1P43699 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NKX2-1P43699 VDAC2P1-201ENST00000399358 958 ntBASIC4.34□□□□□ -1.71
NKX2-1P43699 MTCO2P8-201ENST00000412213 658 ntBASIC4.34□□□□□ -1.71
NKX2-1P43699 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.34□□□□□ -1.71
NKX2-1P43699 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.34□□□□□ -1.71
NKX2-1P43699 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.34□□□□□ -1.71
NKX2-1P43699 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.34□□□□□ -1.71
NKX2-1P43699 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.34□□□□□ -1.71
NKX2-1P43699 MTCO2P17-201ENST00000424336 677 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms