RNA–Protein interactions for RNA: ENST00000440356.1

AC004854.1-201, humanhuman

BASIC

Gene AC004854.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004854.1-201ENST00000440356 AEBP2Q6ZN18 517 aaPredicted RBP28.49■■■□□ 2.15
AC004854.1-201ENST00000440356 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
AC004854.1-201ENST00000440356 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
AC004854.1-201ENST00000440356 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
AC004854.1-201ENST00000440356 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
AC004854.1-201ENST00000440356 FOXD1Q16676 465 aa22.49■■□□□ 1.19
AC004854.1-201ENST00000440356 ADRA2BP18089 450 aa21.54■■□□□ 1.04
AC004854.1-201ENST00000440356 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
AC004854.1-201ENST00000440356 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
AC004854.1-201ENST00000440356 MSH5O43196 834 aa20.83■□□□□ 0.93
AC004854.1-201ENST00000440356 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
AC004854.1-201ENST00000440356 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
AC004854.1-201ENST00000440356 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
AC004854.1-201ENST00000440356 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
AC004854.1-201ENST00000440356 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
AC004854.1-201ENST00000440356 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
AC004854.1-201ENST00000440356 KCNA4P22459 653 aa19.23■□□□□ 0.67
AC004854.1-201ENST00000440356 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
AC004854.1-201ENST00000440356 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
AC004854.1-201ENST00000440356 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
AC004854.1-201ENST00000440356 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
AC004854.1-201ENST00000440356 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
AC004854.1-201ENST00000440356 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
AC004854.1-201ENST00000440356 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
AC004854.1-201ENST00000440356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
AC004854.1-201ENST00000440356 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
AC004854.1-201ENST00000440356 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
AC004854.1-201ENST00000440356 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
AC004854.1-201ENST00000440356 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
AC004854.1-201ENST00000440356 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
AC004854.1-201ENST00000440356 ZBTB22O15209 634 aa17.66■□□□□ 0.42
AC004854.1-201ENST00000440356 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
AC004854.1-201ENST00000440356 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
AC004854.1-201ENST00000440356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
AC004854.1-201ENST00000440356 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
AC004854.1-201ENST00000440356 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
AC004854.1-201ENST00000440356 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
AC004854.1-201ENST00000440356 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
AC004854.1-201ENST00000440356 APLP2Q06481 763 aa17.35■□□□□ 0.37
AC004854.1-201ENST00000440356 CAPN15O75808 1086 aa17.23■□□□□ 0.35
AC004854.1-201ENST00000440356 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
AC004854.1-201ENST00000440356 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
AC004854.1-201ENST00000440356 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
AC004854.1-201ENST00000440356 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
AC004854.1-201ENST00000440356 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
AC004854.1-201ENST00000440356 DSG3P32926 999 aa16.9■□□□□ 0.3
AC004854.1-201ENST00000440356 ABCB7O75027 752 aa16.88■□□□□ 0.29
AC004854.1-201ENST00000440356 POLA2Q14181 598 aa16.79■□□□□ 0.28
AC004854.1-201ENST00000440356 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
AC004854.1-201ENST00000440356 FBLN2P98095 1184 aa16.44■□□□□ 0.22
AC004854.1-201ENST00000440356 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
AC004854.1-201ENST00000440356 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
AC004854.1-201ENST00000440356 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
AC004854.1-201ENST00000440356 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
AC004854.1-201ENST00000440356 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
AC004854.1-201ENST00000440356 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
AC004854.1-201ENST00000440356 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
AC004854.1-201ENST00000440356 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
AC004854.1-201ENST00000440356 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
AC004854.1-201ENST00000440356 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
AC004854.1-201ENST00000440356 FKBP8Q14318 412 aa15.87■□□□□ 0.13
AC004854.1-201ENST00000440356 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
AC004854.1-201ENST00000440356 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
AC004854.1-201ENST00000440356 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
AC004854.1-201ENST00000440356 PROM2Q8N271 834 aa15.6■□□□□ 0.09
AC004854.1-201ENST00000440356 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
AC004854.1-201ENST00000440356 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
AC004854.1-201ENST00000440356 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
AC004854.1-201ENST00000440356 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
AC004854.1-201ENST00000440356 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
AC004854.1-201ENST00000440356 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
AC004854.1-201ENST00000440356 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
AC004854.1-201ENST00000440356 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
AC004854.1-201ENST00000440356 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
AC004854.1-201ENST00000440356 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
AC004854.1-201ENST00000440356 MIER1Q8N108 512 aa15.16■□□□□ 0.02
AC004854.1-201ENST00000440356 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
AC004854.1-201ENST00000440356 POTEHQ6S545 545 aa15.14■□□□□ 0.01
AC004854.1-201ENST00000440356 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
AC004854.1-201ENST00000440356 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
AC004854.1-201ENST00000440356 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
AC004854.1-201ENST00000440356 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
AC004854.1-201ENST00000440356 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
AC004854.1-201ENST00000440356 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC004854.1-201ENST00000440356 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
AC004854.1-201ENST00000440356 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
AC004854.1-201ENST00000440356 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
AC004854.1-201ENST00000440356 HAX1O00165 279 aa14.85□□□□□ -0.03
AC004854.1-201ENST00000440356 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
AC004854.1-201ENST00000440356 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
AC004854.1-201ENST00000440356 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
AC004854.1-201ENST00000440356 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
AC004854.1-201ENST00000440356 NUBP1P53384 320 aa14.72□□□□□ -0.05
AC004854.1-201ENST00000440356 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
AC004854.1-201ENST00000440356 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
AC004854.1-201ENST00000440356 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
AC004854.1-201ENST00000440356 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
AC004854.1-201ENST00000440356 EVX2Q03828 476 aa14.65□□□□□ -0.06
AC004854.1-201ENST00000440356 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
AC004854.1-201ENST00000440356 GSE1Q14687 1217 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 698.3 ms