Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 AL731532.2-201ENST00000623542 1953 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.99□□□□□ -1.61
HOXA9P31269 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 VDAC2P1-201ENST00000399358 958 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AL049693.1-201ENST00000402760 611 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC233289.1-201ENST00000403700 508 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AL591848.1-201ENST00000413092 322 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 AL592293.2-201ENST00000422292 996 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 CHIAP3-201ENST00000423668 1133 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 RSL24D1P6-201ENST00000426934 401 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA9P31269 AL451139.1-201ENST00000434718 346 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA9P31269 MTND2P28-201ENST00000457540 1044 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA9P31269 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA9P31269 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA9P31269 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA9P31269 ATP5J2P6-201ENST00000565203 266 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 RN7SL652P-201ENST00000577769 300 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC069061.3-201ENST00000582254 823 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA9P31269 AL121890.2-201ENST00000617644 465 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA9P31269 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA9P31269 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA9P31269 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA9P31269 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA9P31269 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA9P31269 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXA9P31269 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA9P31269 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA9P31269 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA9P31269 AC004817.4-201ENST00000602396 3625 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 RNA5SP447-201ENST00000363749 119 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 SETP15-201ENST00000412724 337 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AL356968.2-201ENST00000412769 1257 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA9P31269 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC097523.2-201ENST00000435551 652 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 H2AFZP5-201ENST00000446960 382 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC239798.3-201ENST00000454459 408 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC103987.1-201ENST00000473394 348 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 NIP7P2-201ENST00000485801 544 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC013356.1-201ENST00000489027 564 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA9P31269 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA9P31269 RNU6-709P-201ENST00000517257 104 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC068993.1-201ENST00000546724 589 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC124856.1-201ENST00000600819 896 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 AC008782.1-201ENST00000603386 430 ntBASIC4.98□□□□□ -1.61
HOXA9P31269 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA9P31269 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA9P31269 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.98□□□□□ -1.61
HOXA9P31269 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA9P31269 AC108751.5-201ENST00000492880 1336 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA9P31269 AC008079.2-201ENST00000623543 20396 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 ZNF137P-201ENST00000456718 1920 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA9P31269 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 CASC19-255ENST00000641733 1385 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 BMS1P3-201ENST00000372011 932 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 U3.22-201ENST00000391120 215 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 RN7SKP16-201ENST00000410180 299 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 RNU4-25P-201ENST00000410569 230 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA9P31269 RPEP3-201ENST00000425462 676 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AL732292.1-201ENST00000426692 226 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA9P31269 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA9P31269 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA9P31269 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXA9P31269 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 RPS4XP12-201ENST00000461747 709 ntBASIC4.97□□□□□ -1.61
HOXA9P31269 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms