Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF40O75150 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF40O75150 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
RNF40O75150 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF40O75150 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.9□□□□□ -1.15
RNF40O75150 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.9□□□□□ -1.15
RNF40O75150 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF40O75150 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF40O75150 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 ERCC6-202ENST00000374127 1782 ntBASIC7.89□□□□□ -1.15
RNF40O75150 NUP58P1-201ENST00000502546 1738 ntBASIC7.89□□□□□ -1.15
RNF40O75150 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RNF40O75150 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 NACAP2-201ENST00000318548 624 ntBASIC7.89□□□□□ -1.15
RNF40O75150 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF40O75150 Y_RNA.25-201ENST00000362528 102 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RNU6-98P-201ENST00000384173 107 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RNU6-456P-201ENST00000384493 107 ntBASIC7.89□□□□□ -1.15
RNF40O75150 SNORD116-23-201ENST00000384645 92 ntBASIC7.89□□□□□ -1.15
RNF40O75150 MIR640-201ENST00000385086 96 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RNU6-244P-201ENST00000391028 104 ntBASIC7.89□□□□□ -1.15
RNF40O75150 MTCYBP4-201ENST00000401524 249 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AL121834.1-202ENST00000404494 277 ntBASIC7.89□□□□□ -1.15
RNF40O75150 MIR1305-201ENST00000408300 86 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RN7SKP247-201ENST00000411094 308 ntBASIC7.89□□□□□ -1.15
RNF40O75150 USP24P1-201ENST00000433802 779 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF40O75150 RPS15AP9-201ENST00000439856 381 ntBASIC7.89□□□□□ -1.15
RNF40O75150 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 AC013429.1-201ENST00000456604 422 ntBASIC7.89□□□□□ -1.15
RNF40O75150 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.89□□□□□ -1.15
RNF40O75150 Y_RNA.635-201ENST00000459041 101 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RPS10P28-201ENST00000480396 498 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RPL7AP30-201ENST00000482859 796 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RN7SL635P-201ENST00000492123 296 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 AC104986.1-201ENST00000517978 436 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AC100823.2-201ENST00000518337 699 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF40O75150 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.89□□□□□ -1.15
RNF40O75150 AC104785.1-201ENST00000603220 588 ntBASIC7.89□□□□□ -1.15
RNF40O75150 RNU6-87P-201ENST00000607561 108 ntBASIC7.89□□□□□ -1.15
RNF40O75150 AP004247.3-201ENST00000608682 624 ntBASIC7.89□□□□□ -1.15
RNF40O75150 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 AL121985.3-201ENST00000620690 523 ntBASIC7.89□□□□□ -1.15
RNF40O75150 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF40O75150 AC090337.1-201ENST00000579651 2074 ntBASIC7.89□□□□□ -1.15
RNF40O75150 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF40O75150 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF40O75150 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 AC090132.1-201ENST00000524071 1480 ntBASIC7.88□□□□□ -1.15
RNF40O75150 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 DBF4P1-201ENST00000412976 1892 ntBASIC7.88□□□□□ -1.15
RNF40O75150 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 RNU4-20P-201ENST00000365601 151 ntBASIC7.88□□□□□ -1.15
RNF40O75150 RPL23AP32-201ENST00000395315 459 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 RN7SKP232-201ENST00000410170 290 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AL139135.1-201ENST00000412675 209 ntBASIC7.88□□□□□ -1.15
RNF40O75150 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 AL161742.1-201ENST00000418154 584 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 AL592114.2-201ENST00000440142 532 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.88□□□□□ -1.15
RNF40O75150 CXCR2P1-202ENST00000443392 1074 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms