Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BPTFP1-201ENST00000579209 492 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC012065.4-201ENST00000602445 679 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC006566.1-201ENST00000608943 513 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 U1.34-201ENST00000618578 162 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 OR5AK4P-201ENST00000635912 903 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC011455.2-201ENST00000599320 3336 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC105235.1-201ENST00000623208 1816 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 CASC19-260ENST00000641828 2001 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 RN7SKP171-201ENST00000364417 303 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC114814.2-201ENST00000419195 485 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 MTND4P28-201ENST00000426217 387 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 Z93242.1-201ENST00000427102 353 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 PPIAP17-201ENST00000438507 471 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 NANOGNBP1-201ENST00000448444 480 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC003071.1-201ENST00000451219 789 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC239798.3-201ENST00000454459 408 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 RN7SL643P-201ENST00000471845 291 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 RN7SL649P-201ENST00000496974 275 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC106822.1-201ENST00000502647 526 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SUMO2P4-201ENST00000504193 276 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC109471.1-201ENST00000511631 612 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 RN7SKP298-201ENST00000515950 94 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SNORA81.2-201ENST00000516868 170 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 COX6B1P4-201ENST00000519826 484 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 IGHV4-55-201ENST00000520889 368 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC092709.1-201ENST00000521355 1045 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC118273.2-201ENST00000532092 465 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 POLR2KP1-201ENST00000553226 168 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 MIR4528-201ENST00000577763 90 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC005332.4-201ENST00000592752 579 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL390816.3-201ENST00000604527 1066 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL353621.2-201ENST00000605340 133 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms