Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 Y_RNA.61-201ENST00000362835 102 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 MIR433-201ENST00000384837 93 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 VIM2P-201ENST00000402383 1294 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 FGF7P8-201ENST00000402994 292 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 RAB11AP1-201ENST00000442978 646 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 TRIM60P16-201ENST00000444048 694 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC103563.5-201ENST00000455643 364 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 RN7SL221P-201ENST00000466190 281 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC109462.1-201ENST00000491087 368 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 SNRPCP11-201ENST00000492453 205 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC023424.2-201ENST00000493479 777 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 RNU6-507P-201ENST00000516045 100 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 RNA5SP400-201ENST00000517155 111 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 IGHV3-63-201ENST00000518422 341 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 OR4H6P-201ENST00000563771 921 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 MIR212-201ENST00000586026 110 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC005332.4-201ENST00000592752 579 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC006924.1-201ENST00000610750 559 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 MIR6885-201ENST00000612241 66 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC009704.2-201ENST00000618739 483 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 MIR7159-201ENST00000620587 66 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC211486.4-201ENST00000621495 113 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC073348.1-201ENST00000623002 331 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC135352.1-201ENST00000506173 1418 ntBASIC5.91□□□□□ -1.46
NUP43Q8NFH3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP43Q8NFH3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 LYARP1-201ENST00000436977 1501 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AL136984.1-201ENST00000607611 1893 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 ZNF733P-202ENST00000444809 1573 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 RNU5D-1-201ENST00000363299 116 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 RN7SKP237-201ENST00000364663 301 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 RNA5SP485-201ENST00000365053 119 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 RNU5A-6P-201ENST00000384136 116 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 CIR1P3-201ENST00000405137 479 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AC245054.1-201ENST00000420944 258 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 VN1R20P-201ENST00000425215 966 ntBASIC5.9□□□□□ -1.46
NUP43Q8NFH3 AC002069.1-201ENST00000429649 1159 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms