Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC096664.2-201ENST00000411843 406 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 RPL12P9-201ENST00000412942 488 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC068533.1-201ENST00000418542 415 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 E2F6P2-201ENST00000420708 748 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 NFYAP1-201ENST00000431953 972 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC243960.7-201ENST00000623532 707 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 SNRPFP1-201ENST00000414761 252 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC046176.1-201ENST00000435260 1170 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 PPIAP15-201ENST00000479662 484 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 RNU1-6P-201ENST00000516290 144 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC020634.1-201ENST00000608701 549 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC107068.1-201ENST00000563286 4218 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC090515.3-201ENST00000560431 315 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC015967.1-201ENST00000619893 476 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AL672167.1-204ENST00000641875 3017 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC024560.2-201ENST00000507981 1497 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 OR4K6P-201ENST00000416478 897 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC140479.3-201ENST00000418944 1126 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC104849.1-201ENST00000462623 405 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AL451086.1-201ENST00000605596 223 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AL391684.1-202ENST00000641293 1636 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 SNORA71.2-201ENST00000364941 134 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC138761.5-201ENST00000433967 325 ntBASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.81□□□□□ -1.8
CSMD1Q96PZ7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 MIR200C-201ENST00000384980 68 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 RN7SKP159-201ENST00000410657 292 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 MTND6P5-201ENST00000448266 512 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC026427.2-201ENST00000506228 536 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 RN7SKP157-201ENST00000516174 282 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC068733.2-201ENST00000605434 1418 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC011447.7-201ENST00000624228 1590 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms