Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PDCD5P1-201ENST00000543528 309 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC027243.2-201ENST00000602530 724 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 RPL21P136-201ENST00000605378 396 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC025175.1-201ENST00000606482 759 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 MIR1264-201ENST00000616374 69 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC007342.8-201ENST00000623278 678 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC015908.5-201ENST00000623289 343 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFT1Q96AA3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
RFT1Q96AA3 AC093535.2-201ENST00000624769 2326 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 CCT8P1-201ENST00000413611 1657 ntBASIC4.57□□□□□ -1.68
RFT1Q96AA3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFT1Q96AA3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL592182.3-201ENST00000642132 3304 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL512283.1-201ENST00000606756 1384 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC019155.1-201ENST00000382242 574 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 RNU6-185P-201ENST00000384421 107 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 MIR589-201ENST00000385238 99 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 NCSTNP1-201ENST00000406229 144 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 Z68694.1-201ENST00000413929 841 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL596448.1-201ENST00000415024 392 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL672138.1-201ENST00000450604 1015 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 UBA52P3-201ENST00000491303 382 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC010468.3-201ENST00000508225 458 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 SNORD46.2-201ENST00000516021 102 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 RNA5SP464-201ENST00000516251 108 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC092474.3-201ENST00000603022 568 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 SUMO2P14-201ENST00000604488 293 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC011626.1-201ENST00000604710 562 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AP004607.9-201ENST00000618202 316 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.56□□□□□ -1.68
RFT1Q96AA3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 AC093311.1-201ENST00000506586 2021 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 AP001002.1-201ENST00000625148 1513 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
RFT1Q96AA3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFT1Q96AA3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.55□□□□□ -1.68
RFT1Q96AA3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RFT1Q96AA3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RFT1Q96AA3 OR10J6P-201ENST00000289731 930 ntBASIC4.55□□□□□ -1.68
RFT1Q96AA3 Y_RNA.110-201ENST00000363220 99 ntBASIC4.55□□□□□ -1.68
RFT1Q96AA3 RNA5SP122-201ENST00000384457 108 ntBASIC4.55□□□□□ -1.68
RFT1Q96AA3 RPS24P12-201ENST00000402084 394 ntBASIC4.55□□□□□ -1.68
RFT1Q96AA3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.55□□□□□ -1.68
RFT1Q96AA3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFT1Q96AA3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.55□□□□□ -1.68
RFT1Q96AA3 AC002504.1-201ENST00000438281 691 ntBASIC4.55□□□□□ -1.68
RFT1Q96AA3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms