Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC093535.2-201ENST00000624769 2326 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC010329.2-201ENST00000595195 2737 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 SNORA70-201ENST00000384436 135 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 AL357515.1-201ENST00000402967 542 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 TBCAP2-201ENST00000416175 326 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 MTND4LP13-201ENST00000425022 298 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 OR2AH1P-201ENST00000425717 928 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 RBMY2QP-201ENST00000429799 1147 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 MTCO3P17-201ENST00000443775 513 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 BTF3P6-201ENST00000448054 499 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC008410.1-201ENST00000483777 339 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 HMGB3P16-201ENST00000508037 287 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC016769.4-201ENST00000616893 535 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 DDX18P5-201ENST00000534547 1306 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.34□□□□□ -1.71
CSNK1A1P48729 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 AC008758.3-201ENST00000507003 1829 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSNK1A1P48729 DDX18P3-201ENST00000404856 2007 ntBASIC4.34□□□□□ -1.71
CSNK1A1P48729 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CSNK1A1P48729 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC005522.1-201ENST00000395416 346 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 SPTLC1P2-201ENST00000407089 121 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 DPPA2P3-201ENST00000411853 655 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 CHEK2P3-201ENST00000416118 248 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC012519.1-201ENST00000424588 610 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 MTND6P18-201ENST00000439477 513 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AL031584.1-201ENST00000447169 754 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC000111.2-201ENST00000448200 210 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 SLC25A18P1-201ENST00000449385 454 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 OR5M14P-201ENST00000506803 618 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 RNU4-18P-201ENST00000516751 149 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC026688.1-201ENST00000520639 1168 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AP000919.1-201ENST00000582850 985 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AP001521.2-201ENST00000608772 546 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC015871.5-202ENST00000623252 701 ntBASIC4.33□□□□□ -1.72
CSNK1A1P48729 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CSNK1A1P48729 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
CSNK1A1P48729 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK1A1P48729 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSNK1A1P48729 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms