Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 DDX18P4-201ENST00000511690 1966 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RNU6-1331P-201ENST00000363658 106 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AL590762.2-201ENST00000395798 571 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RAB5CP1-201ENST00000395972 580 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 GJA6P-201ENST00000415117 1042 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 GLUD1P9-201ENST00000420997 1173 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 ARL4AP3-201ENST00000441452 574 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AL606490.1-201ENST00000452266 765 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RN7SL172P-201ENST00000460535 303 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RPS18P6-201ENST00000476880 458 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 RN7SL817P-201ENST00000480777 288 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC079841.1-201ENST00000481228 950 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 ARL4AP1-201ENST00000503220 705 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC011411.1-201ENST00000509592 876 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC021146.3-201ENST00000511911 260 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC092490.3-201ENST00000545370 572 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 MIR5699-201ENST00000578903 90 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 PABPC1P6-201ENST00000445594 1829 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.48□□□□□ -1.69
VAPAQ9P0L0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AP001002.1-201ENST00000625148 1513 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 HSPD1P14-201ENST00000432666 1618 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC139713.2-215ENST00000641428 5037 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 IL6STP1-201ENST00000346911 1020 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RNU1-20P-201ENST00000363314 162 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC005008.1-201ENST00000456151 612 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RN7SL214P-201ENST00000487317 265 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC004980.4-201ENST00000513375 203 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 GSTP1P1-201ENST00000548078 319 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC122134.1-201ENST00000565664 1104 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RN7SL802P-201ENST00000577858 299 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC096553.1-201ENST00000605169 829 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 CR381572.2-201ENST00000624852 397 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 LINC01739-205ENST00000641890 573 ntBASIC4.47□□□□□ -1.69
VAPAQ9P0L0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VAPAQ9P0L0 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.69
VAPAQ9P0L0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAPAQ9P0L0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.69
VAPAQ9P0L0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAPAQ9P0L0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAPAQ9P0L0 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.69
VAPAQ9P0L0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAPAQ9P0L0 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms