Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMC3-202ENST00000558726 4644 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 TARS2P1-201ENST00000506124 2041 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CD4-201ENST00000011653 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ADD3-201ENST00000277900 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 POU6F1-201ENST00000333640 2960 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SAA1-201ENST00000356524 615 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RNA5S9-201ENST00000364451 119 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AL162293.1-201ENST00000373508 2112 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-1292P-201ENST00000383856 107 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RIMKLBP1-201ENST00000408914 1164 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SKP267-201ENST00000410381 285 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-887P-201ENST00000410660 100 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC016027.3-201ENST00000429618 361 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC007969.2-201ENST00000441891 191 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SFTPA3P-201ENST00000446429 367 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 USF1P1-201ENST00000451645 526 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 PFN1P10-201ENST00000455962 327 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC069454.1-201ENST00000465845 468 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL328P-201ENST00000484033 300 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC090311.1-201ENST00000490739 249 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RPS26P48-201ENST00000491713 339 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC025752.1-201ENST00000503317 558 ntTSL 4 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ASS1P10-201ENST00000507235 1244 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-1149P-201ENST00000516810 97 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC068189.2-201ENST00000518598 794 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC104316.2-201ENST00000559049 326 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC025281.1-201ENST00000567026 265 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008753.3-201ENST00000595160 446 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AL355353.1-201ENST00000604014 330 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 FGFR2-223ENST00000611527 435 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR6125-201ENST00000618986 96 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 BX005132.2-201ENST00000641254 464 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CBLL1-205ENST00000440859 4432 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 NELL1-202ENST00000325319 3094 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 BORA-203ENST00000390667 2936 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 OAS2-203ENST00000449768 2072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 N6AMT1-202ENST00000351429 4781 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AP001180.1-201ENST00000562202 3566 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 AC084759.3-201ENST00000624468 3944 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 IFT46-207ENST00000530872 1566 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AC125336.1-201ENST00000508893 2827 ntBASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 AMMECR1-202ENST00000372057 3380 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ADGRF3-203ENST00000421160 3353 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 SFTPA1-201ENST00000398636 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 DLEC1-202ENST00000346219 5490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP3-3Q9BYR6 ITGAE-201ENST00000263087 3858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms