RNA–Protein interactions for RNA: ENST00000410660.1

RNU6-887P-201, Transcript of RNA, U6 small nuclear 887, pseudogene, humanhuman

BASIC

Gene RNU6-887P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-887P-201ENST00000410660 AEBP2Q6ZN18 517 aaPredicted RBP11.63□□□□□ -0.55
RNU6-887P-201ENST00000410660 CHIC1Q5VXU3 224 aa10.8□□□□□ -0.68
RNU6-887P-201ENST00000410660 SENP3Q9H4L4 574 aaPredicted RBP9.95□□□□□ -0.82
RNU6-887P-201ENST00000410660 PHF23Q9BUL5 403 aaPredicted RBP9.76□□□□□ -0.85
RNU6-887P-201ENST00000410660 POTEDQ86YR6 584 aa9.54□□□□□ -0.88
RNU6-887P-201ENST00000410660 FOXD1Q16676 465 aa9.36□□□□□ -0.91
RNU6-887P-201ENST00000410660 MSH5O43196 834 aa8.92□□□□□ -0.98
RNU6-887P-201ENST00000410660 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
RNU6-887P-201ENST00000410660 PPP6R1Q9UPN7 881 aa8.39□□□□□ -1.07
RNU6-887P-201ENST00000410660 ADRA2BP18089 450 aa8.32□□□□□ -1.08
RNU6-887P-201ENST00000410660 PLPPR3Q6T4P5 718 aa8.2□□□□□ -1.1
RNU6-887P-201ENST00000410660 CACNB1Q02641 598 aaPredicted RBP7.93□□□□□ -1.14
RNU6-887P-201ENST00000410660 DMRT2Q9Y5R5 561 aa7.83□□□□□ -1.16
RNU6-887P-201ENST00000410660 MAPK8IP2Q13387 824 aaPredicted RBP7.8□□□□□ -1.16
RNU6-887P-201ENST00000410660 RNF39Q9H2S5 420 aa7.58□□□□□ -1.2
RNU6-887P-201ENST00000410660 SCAF1Q9H7N4 1312 aaKnown RBP7.56□□□□□ -1.2
RNU6-887P-201ENST00000410660 DCAF8L1A6NGE4 600 aa7.51□□□□□ -1.21
RNU6-887P-201ENST00000410660 C1QBPQ07021 282 aaKnown RBP7.42□□□□□ -1.22
RNU6-887P-201ENST00000410660 POTEHQ6S545 545 aa7.37□□□□□ -1.23
RNU6-887P-201ENST00000410660 HOXD11P31277 338 aaPredicted RBP7.36□□□□□ -1.23
RNU6-887P-201ENST00000410660 DNAJC5BQ9UF47 199 aa7.18□□□□□ -1.26
RNU6-887P-201ENST00000410660 RNF216Q9NWF9 866 aaPredicted RBP7.17□□□□□ -1.26
RNU6-887P-201ENST00000410660 PPP4R3CPQ6ZMV5 832 aa7.13□□□□□ -1.27
RNU6-887P-201ENST00000410660 CNKSR2Q8WXI2 1034 aa7.1□□□□□ -1.27
RNU6-887P-201ENST00000410660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.98□□□□□ -1.29
RNU6-887P-201ENST00000410660 DSG3P32926 999 aa6.94□□□□□ -1.3
RNU6-887P-201ENST00000410660 SPINK5Q9NQ38 1064 aaPredicted RBP6.87□□□□□ -1.31
RNU6-887P-201ENST00000410660 CAPN15O75808 1086 aa6.84□□□□□ -1.31
RNU6-887P-201ENST00000410660 U3KPZ7 1027 aaPredicted RBP6.83□□□□□ -1.32
RNU6-887P-201ENST00000410660 SP7Q8TDD2 431 aaPredicted RBP6.68□□□□□ -1.34
RNU6-887P-201ENST00000410660 NCBP3Q53F19 620 aaKnown RBP6.67□□□□□ -1.34
RNU6-887P-201ENST00000410660 CHRDL2Q6WN34 429 aa6.67□□□□□ -1.34
RNU6-887P-201ENST00000410660 ABCB7O75027 752 aa6.66□□□□□ -1.34
RNU6-887P-201ENST00000410660 NPM3O75607 178 aaKnown RBP6.63□□□□□ -1.35
RNU6-887P-201ENST00000410660 TRHP20396 242 aaPredicted RBP6.62□□□□□ -1.35
RNU6-887P-201ENST00000410660 RBM42Q9BTD8 480 aaKnown RBP6.6□□□□□ -1.35
RNU6-887P-201ENST00000410660 ZNF219Q9P2Y4 722 aaPredicted RBP6.59□□□□□ -1.35
RNU6-887P-201ENST00000410660 APLP2Q06481 763 aa6.51□□□□□ -1.37
RNU6-887P-201ENST00000410660 SLC4A2P04920 1241 aa6.47□□□□□ -1.37
RNU6-887P-201ENST00000410660 PIP4P2Q8N4L2 257 aa6.41□□□□□ -1.38
RNU6-887P-201ENST00000410660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.4□□□□□ -1.38
RNU6-887P-201ENST00000410660 HAX1O00165 279 aa6.4□□□□□ -1.38
RNU6-887P-201ENST00000410660 HNRNPUL2Q1KMD3 747 aaKnown RBP6.4□□□□□ -1.38
RNU6-887P-201ENST00000410660 AKT1S1Q96B36 256 aa6.36□□□□□ -1.39
RNU6-887P-201ENST00000410660 SAMD1Q6SPF0 538 aaPredicted RBP6.35□□□□□ -1.39
RNU6-887P-201ENST00000410660 POLA2Q14181 598 aa6.34□□□□□ -1.39
RNU6-887P-201ENST00000410660 EVX2Q03828 476 aa6.33□□□□□ -1.4
RNU6-887P-201ENST00000410660 REM2Q8IYK8 340 aaPredicted RBP6.31□□□□□ -1.4
RNU6-887P-201ENST00000410660 FXR2P51116 673 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU6-887P-201ENST00000410660 PITPNM1O00562 1244 aa6.26□□□□□ -1.41
RNU6-887P-201ENST00000410660 LHX8Q68G74 356 aa6.26□□□□□ -1.41
RNU6-887P-201ENST00000410660 PLSCR2Q9NRY7 297 aa6.25□□□□□ -1.41
RNU6-887P-201ENST00000410660 OSCARQ8IYS5 282 aa6.18□□□□□ -1.42
RNU6-887P-201ENST00000410660 GABBR2O75899 941 aa6.14□□□□□ -1.43
RNU6-887P-201ENST00000410660 ZBTB12Q9Y330 459 aaPredicted RBP6.14□□□□□ -1.43
RNU6-887P-201ENST00000410660 C19orf67A6NJJ6 358 aa6.12□□□□□ -1.43
RNU6-887P-201ENST00000410660 MYCNP04198 464 aaPredicted RBP6.12□□□□□ -1.43
RNU6-887P-201ENST00000410660 PRKAR2AP13861 404 aaKnown RBP6.08□□□□□ -1.44
RNU6-887P-201ENST00000410660 KCNA4P22459 653 aa6.08□□□□□ -1.44
RNU6-887P-201ENST00000410660 ATF5Q9Y2D1 282 aaPredicted RBP6.06□□□□□ -1.44
RNU6-887P-201ENST00000410660 POTEIP0CG38 1075 aa6.03□□□□□ -1.44
RNU6-887P-201ENST00000410660 CLEC11AQ9Y240 323 aa5.96□□□□□ -1.46
RNU6-887P-201ENST00000410660 SPDYE1Q8NFV5 336 aaPredicted RBP5.94□□□□□ -1.46
RNU6-887P-201ENST00000410660 SPDYE2BA6NHP3 402 aa5.93□□□□□ -1.46
RNU6-887P-201ENST00000410660 POTEMA6NI47 508 aa5.93□□□□□ -1.46
RNU6-887P-201ENST00000410660 SPDYE6P0CI01 402 aa5.93□□□□□ -1.46
RNU6-887P-201ENST00000410660 SPDYE2Q495Y8 402 aa5.93□□□□□ -1.46
RNU6-887P-201ENST00000410660 CHADLQ6NUI6 762 aa5.93□□□□□ -1.46
RNU6-887P-201ENST00000410660 POTEGQ6S5H5 508 aa5.89□□□□□ -1.47
RNU6-887P-201ENST00000410660 OTUD5Q96G74 571 aa5.89□□□□□ -1.47
RNU6-887P-201ENST00000410660 CD44P16070 742 aaKnown RBP5.86□□□□□ -1.47
RNU6-887P-201ENST00000410660 CLCN6P51797 869 aa5.84□□□□□ -1.47
RNU6-887P-201ENST00000410660 DCBLD2Q96PD2 775 aa5.84□□□□□ -1.47
RNU6-887P-201ENST00000410660 POTEB2H3BUK9 544 aa5.82□□□□□ -1.48
RNU6-887P-201ENST00000410660 PCDH10Q9P2E7 1040 aa5.82□□□□□ -1.48
RNU6-887P-201ENST00000410660 SSUH2Q9Y2M2 353 aa5.82□□□□□ -1.48
RNU6-887P-201ENST00000410660 FOXD4L1Q9NU39 408 aa5.81□□□□□ -1.48
RNU6-887P-201ENST00000410660 PRR29P0C7W0 189 aa5.79□□□□□ -1.48
RNU6-887P-201ENST00000410660 FBLN2P98095 1184 aa5.79□□□□□ -1.48
RNU6-887P-201ENST00000410660 ZNF692Q9BU19 519 aaPredicted RBP5.78□□□□□ -1.48
RNU6-887P-201ENST00000410660 FARP1Q9Y4F1 1045 aaPredicted RBP5.77□□□□□ -1.49
RNU6-887P-201ENST00000410660 MKRN4PQ13434 485 aaPredicted RBP5.75□□□□□ -1.49
RNU6-887P-201ENST00000410660 ZNF579Q8NAF0 562 aaKnown RBP5.75□□□□□ -1.49
RNU6-887P-201ENST00000410660 GALR2O43603 387 aaPredicted RBP5.73□□□□□ -1.49
RNU6-887P-201ENST00000410660 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
RNU6-887P-201ENST00000410660 PABPN1Q86U42 306 aaKnown RBP eCLIP5.69□□□□□ -1.5
RNU6-887P-201ENST00000410660 ZRANB1Q9UGI0 708 aa5.69□□□□□ -1.5
RNU6-887P-201ENST00000410660 POTEJP0CG39 1038 aa5.67□□□□□ -1.5
RNU6-887P-201ENST00000410660 PELP1Q8IZL8 1130 aaKnown RBP5.67□□□□□ -1.5
RNU6-887P-201ENST00000410660 ATXN8OSP0DMR3 200 aa5.66□□□□□ -1.5
RNU6-887P-201ENST00000410660 FAM163AQ96GL9 167 aaPredicted RBP5.63□□□□□ -1.51
RNU6-887P-201ENST00000410660 SLC4A1APQ9BWU0 796 aaKnown RBP5.62□□□□□ -1.51
RNU6-887P-201ENST00000410660 METRNQ9UJH8 293 aa5.61□□□□□ -1.51
RNU6-887P-201ENST00000410660 ZBTB22O15209 634 aa5.6□□□□□ -1.51
RNU6-887P-201ENST00000410660 PHF12Q96QT6 1004 aa5.6□□□□□ -1.51
RNU6-887P-201ENST00000410660 MAMSTRQ6ZN01 415 aa5.59□□□□□ -1.51
RNU6-887P-201ENST00000410660 ASTLQ6HA08 431 aaPredicted RBP5.57□□□□□ -1.52
RNU6-887P-201ENST00000410660 CDAN1Q8IWY9 1227 aa5.57□□□□□ -1.52
RNU6-887P-201ENST00000410660 SLC39A7Q92504 469 aa5.56□□□□□ -1.52
RNU6-887P-201ENST00000410660 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms