Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 AL133320.1-201ENST00000621423 2352 ntBASIC7□□□□□ -1.29
HPS1Q92902 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 RNU6-1097P-201ENST00000363586 107 ntBASIC7□□□□□ -1.29
HPS1Q92902 MIR514A2-201ENST00000385131 88 ntBASIC7□□□□□ -1.29
HPS1Q92902 MIR514A3-201ENST00000385132 88 ntBASIC7□□□□□ -1.29
HPS1Q92902 RNU6-1109P-201ENST00000391187 107 ntBASIC7□□□□□ -1.29
HPS1Q92902 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 AP000534.2-201ENST00000412729 568 ntBASIC7□□□□□ -1.29
HPS1Q92902 RPL12P27-201ENST00000414870 496 ntBASIC7□□□□□ -1.29
HPS1Q92902 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7□□□□□ -1.29
HPS1Q92902 RPL21P110-201ENST00000433345 446 ntBASIC7□□□□□ -1.29
HPS1Q92902 PCBP2P1-201ENST00000437262 977 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC092601.1-201ENST00000444526 383 ntBASIC7□□□□□ -1.29
HPS1Q92902 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 AC110749.1-201ENST00000462007 357 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC097493.1-201ENST00000463958 372 ntBASIC7□□□□□ -1.29
HPS1Q92902 RPL7AP2-201ENST00000496515 740 ntBASIC7□□□□□ -1.29
HPS1Q92902 AL031073.1-201ENST00000503029 1139 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7□□□□□ -1.29
HPS1Q92902 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 Y_RNA.665-201ENST00000516177 98 ntBASIC7□□□□□ -1.29
HPS1Q92902 RNU6-150P-201ENST00000516237 95 ntBASIC7□□□□□ -1.29
HPS1Q92902 RNU6-864P-201ENST00000516256 108 ntBASIC7□□□□□ -1.29
HPS1Q92902 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 AC087854.1-201ENST00000519706 414 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 AL845552.1-201ENST00000556820 323 ntBASIC7□□□□□ -1.29
HPS1Q92902 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 AC034105.2-201ENST00000561866 238 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7□□□□□ -1.29
HPS1Q92902 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7□□□□□ -1.29
HPS1Q92902 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 NDUFB9P1-201ENST00000604683 510 ntBASIC7□□□□□ -1.29
HPS1Q92902 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 AC087623.4-201ENST00000606593 695 ntBASIC7□□□□□ -1.29
HPS1Q92902 AC007546.1-201ENST00000619452 559 ntBASIC7□□□□□ -1.29
HPS1Q92902 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7□□□□□ -1.29
HPS1Q92902 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 AP001157.1-201ENST00000550837 2339 ntBASIC7□□□□□ -1.29
HPS1Q92902 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7□□□□□ -1.29
HPS1Q92902 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
HPS1Q92902 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HPS1Q92902 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HPS1Q92902 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS1Q92902 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HPS1Q92902 TRIM51HP-202ENST00000530412 1823 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 FMO10P-201ENST00000455032 1493 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HPS1Q92902 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS1Q92902 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
HPS1Q92902 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS1Q92902 AC018765.1-201ENST00000623357 3446 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS1Q92902 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS1Q92902 MIR135B-201ENST00000362189 97 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 RNU6-582P-201ENST00000362989 107 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 Y_RNA.555-201ENST00000384673 110 ntBASIC6.99□□□□□ -1.29
HPS1Q92902 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms