Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SL516P-201ENST00000496127 297 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 RNU5B-3P-201ENST00000516601 115 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 IGHV3-63-201ENST00000518422 341 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 AC090572.1-201ENST00000519251 160 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 AP000435.1-201ENST00000528539 496 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 RN7SL131P-201ENST00000579043 256 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 GLUD1P4-201ENST00000590914 418 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 AC011447.2-201ENST00000592921 283 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 AC011468.4-201ENST00000603942 409 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 MIR7162-201ENST00000611134 69 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 AL451054.1-201ENST00000621770 772 ntBASIC8.14□□□□□ -1.11
VARS2Q5ST30 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
VARS2Q5ST30 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
VARS2Q5ST30 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 OR56A5-201ENST00000340110 738 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RNU6-777P-201ENST00000364265 104 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 SNORD50.2-201ENST00000365465 70 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RNU6-338P-201ENST00000383888 105 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RNU6-1117P-201ENST00000384525 104 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC113608.1-201ENST00000398740 305 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 U3.31-201ENST00000408113 216 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 MIR320C1-201ENST00000408566 88 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RNU2-36P-201ENST00000410361 191 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC092745.2-202ENST00000411880 369 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 GSTA10P-201ENST00000412182 576 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 ATG3P1-201ENST00000419507 911 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 PSMD8P1-201ENST00000436275 769 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC002504.1-201ENST00000438281 691 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 TRAPPC2P3-201ENST00000443200 321 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AL606490.1-201ENST00000452266 765 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 TREML3P-201ENST00000457327 501 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RPS10P28-201ENST00000480396 498 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 RNU7-51P-201ENST00000516560 62 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 OR7E96P-201ENST00000530816 976 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 AP000857.1-201ENST00000532151 543 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC068446.3-201ENST00000555285 382 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC005262.1-201ENST00000588562 362 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC124319.3-201ENST00000616832 526 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 AL162377.2-201ENST00000624532 337 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
VARS2Q5ST30 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 TPTE2P4-201ENST00000258589 1605 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 DDX50P1-201ENST00000438163 2400 ntBASIC8.13□□□□□ -1.11
VARS2Q5ST30 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARS2Q5ST30 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC105074.1-201ENST00000623380 3095 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 RN7SKP211-201ENST00000363328 315 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms