Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNA1P78396 CEACAMP6-201ENST00000452007 574 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNA1P78396 OR52A4P-201ENST00000472867 958 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 RPL7AP10-201ENST00000481016 791 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC104971.1-201ENST00000495117 578 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 RPS27AP18-201ENST00000515536 459 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNA1P78396 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCNA1P78396 AP001804.2-201ENST00000533932 910 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 AC133555.2-201ENST00000550213 292 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC084759.1-201ENST00000561168 290 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNA1P78396 AL162574.1-201ENST00000615702 950 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 AC025574.1-201ENST00000554784 1653 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCNA1P78396 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CCNA1P78396 AC112198.2-201ENST00000426589 6996 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.58□□□□□ -1.52
CCNA1P78396 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.57□□□□□ -1.52
CCNA1P78396 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNA1P78396 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNA1P78396 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNA1P78396 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 SNORA73.1-201ENST00000363107 205 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 SNORD113.2-201ENST00000364166 89 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 MIR129-1-201ENST00000384972 72 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 RPL23AP1-201ENST00000428990 471 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 RPL12P28-201ENST00000430852 489 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 NPM1P18-201ENST00000434232 732 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AC046176.1-201ENST00000435260 1170 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 MTND2P40-201ENST00000436718 841 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AL162591.2-201ENST00000449634 317 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 RNA5SP392-201ENST00000516905 112 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AC092709.1-201ENST00000521355 1045 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 OR5M2P-201ENST00000529003 936 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNA1P78396 AL110118.1-201ENST00000553543 400 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AC022884.2-201ENST00000578535 580 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.57□□□□□ -1.52
CCNA1P78396 VN1R81P-201ENST00000602085 372 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AL356218.2-201ENST00000605264 187 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 AL159169.2-201ENST00000610061 1269 ntBASIC5.57□□□□□ -1.52
CCNA1P78396 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CCNA1P78396 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNA1P78396 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
CCNA1P78396 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCNA1P78396 AC008079.2-201ENST00000623543 20396 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCNA1P78396 AL357515.1-201ENST00000402967 542 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC098592.2-201ENST00000413158 265 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC006065.1-201ENST00000422539 802 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 FABP7P1-201ENST00000424004 391 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 HMGB3P10-201ENST00000434734 572 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNA1P78396 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNA1P78396 AL691482.1-201ENST00000453255 87 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNA1P78396 MTND2P28-201ENST00000457540 1044 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC103987.1-201ENST00000473394 348 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 STRADBP1-201ENST00000478954 1281 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNA1P78396 RNU1-6P-201ENST00000516290 144 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNA1P78396 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCNA1P78396 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNA1P78396 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.56□□□□□ -1.52
CCNA1P78396 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.56□□□□□ -1.52
CCNA1P78396 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.56□□□□□ -1.52
CCNA1P78396 AL121932.1-201ENST00000605542 214 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC018695.5-201ENST00000605872 315 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AL445423.1-201ENST00000609941 536 ntBASIC5.56□□□□□ -1.52
CCNA1P78396 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNA1P78396 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCNA1P78396 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNA1P78396 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCNA1P78396 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCNA1P78396 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.56□□□□□ -1.52
CCNA1P78396 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.56□□□□□ -1.52
CCNA1P78396 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 AC008758.3-201ENST00000507003 1829 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms