Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBCP0CG48 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.34□□□□□ -1.71
UBCP0CG48 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.34□□□□□ -1.71
UBCP0CG48 FAM60CP-201ENST00000591086 664 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.34□□□□□ -1.71
UBCP0CG48 AL133406.3-201ENST00000606817 541 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 uc_338.18-201ENST00000615451 175 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 AL049794.2-201ENST00000616301 365 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 RMST_5.1-201ENST00000618704 126 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.34□□□□□ -1.71
UBCP0CG48 AC079298.2-201ENST00000623885 459 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.34□□□□□ -1.71
UBCP0CG48 AC136428.4-201ENST00000634254 1155 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
UBCP0CG48 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBCP0CG48 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.71
UBCP0CG48 AC090971.4-201ENST00000560291 1800 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.34□□□□□ -1.71
UBCP0CG48 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.34□□□□□ -1.71
UBCP0CG48 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
UBCP0CG48 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
UBCP0CG48 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
UBCP0CG48 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UBCP0CG48 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBCP0CG48 CASC19-284ENST00000642142 1868 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC011493.1-201ENST00000596753 1632 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 ECM1P2-201ENST00000503354 1577 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBCP0CG48 AC009643.2-201ENST00000603543 1448 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBCP0CG48 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBCP0CG48 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC019155.1-201ENST00000382242 574 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 SNORA17A-201ENST00000391185 133 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBCP0CG48 AL136116.2-201ENST00000404020 785 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 RN7SKP126-201ENST00000411143 300 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.33□□□□□ -1.72
UBCP0CG48 CCRL1P1-201ENST00000449542 1053 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 RHEBP2-201ENST00000450289 600 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 AL645937.3-201ENST00000453647 936 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 RPL7AP28-201ENST00000464513 571 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC009127.1-201ENST00000467090 155 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 RN7SL717P-201ENST00000478343 297 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC108693.1-201ENST00000496068 432 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 BX510359.5-201ENST00000515651 304 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 NPM1P6-201ENST00000521088 871 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 NMNAT1P1-201ENST00000554095 876 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC079395.2-201ENST00000610982 737 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 AC019206.1-201ENST00000621938 425 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 SNORA17.5-201ENST00000630429 132 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 CASC19-264ENST00000641912 1184 ntBASIC4.33□□□□□ -1.72
UBCP0CG48 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
UBCP0CG48 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UBCP0CG48 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBCP0CG48 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBCP0CG48 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
UBCP0CG48 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
UBCP0CG48 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.32□□□□□ -1.72
UBCP0CG48 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UBCP0CG48 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBCP0CG48 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
UBCP0CG48 LINC01109-201ENST00000603837 3081 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBCP0CG48 RNA5SP132-201ENST00000364725 118 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
UBCP0CG48 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UBCP0CG48 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBCP0CG48 RN7SKP59-201ENST00000410520 314 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.32□□□□□ -1.72
UBCP0CG48 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.32□□□□□ -1.72
UBCP0CG48 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBCP0CG48 OR6K4P-201ENST00000423179 955 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 AL353597.2-202ENST00000434901 373 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 AC093716.1-201ENST00000435923 377 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 OR7E125P-201ENST00000443450 846 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.32□□□□□ -1.72
UBCP0CG48 CLIC4P1-201ENST00000453177 535 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
UBCP0CG48 RPL31P53-201ENST00000457065 348 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms