Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 CBX3P1-201ENST00000325243 554 ntBASIC6.8□□□□□ -1.32
SOX1O00570 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 MIR375-201ENST00000362103 64 ntBASIC6.8□□□□□ -1.32
SOX1O00570 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 AL672167.2-201ENST00000377164 879 ntBASIC6.8□□□□□ -1.32
SOX1O00570 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 Y_RNA.450-201ENST00000384198 113 ntBASIC6.8□□□□□ -1.32
SOX1O00570 Y_RNA.453-201ENST00000384223 109 ntBASIC6.8□□□□□ -1.32
SOX1O00570 MIR23A-201ENST00000385245 73 ntBASIC6.8□□□□□ -1.32
SOX1O00570 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.8□□□□□ -1.32
SOX1O00570 RPL34P3-201ENST00000421454 338 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.8□□□□□ -1.32
SOX1O00570 SEPT7P5-201ENST00000434048 306 ntBASIC6.8□□□□□ -1.32
SOX1O00570 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 AL138787.1-202ENST00000437804 898 ntBASIC6.8□□□□□ -1.32
SOX1O00570 USP9YP8-201ENST00000441913 500 ntBASIC6.8□□□□□ -1.32
SOX1O00570 ARL5AP2-201ENST00000444698 533 ntBASIC6.8□□□□□ -1.32
SOX1O00570 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX1O00570 CALM1P2-201ENST00000452941 448 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC009963.2-201ENST00000453431 138 ntBASIC6.8□□□□□ -1.32
SOX1O00570 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX1O00570 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX1O00570 ARL2BPP6-201ENST00000512757 439 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX1O00570 OR5AL2P-201ENST00000532185 920 ntBASIC6.8□□□□□ -1.32
SOX1O00570 SAA3P-201ENST00000533267 365 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.8□□□□□ -1.32
SOX1O00570 UBE2FP2-201ENST00000566646 462 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC044792.1-201ENST00000593294 196 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AL354760.1-201ENST00000608357 643 ntBASIC6.8□□□□□ -1.32
SOX1O00570 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.8□□□□□ -1.32
SOX1O00570 AC018816.2-201ENST00000621460 353 ntBASIC6.8□□□□□ -1.32
SOX1O00570 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX1O00570 AC073488.2-201ENST00000631903 751 ntBASIC6.8□□□□□ -1.32
SOX1O00570 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 AC010886.1-201ENST00000437380 2869 ntBASIC6.8□□□□□ -1.32
SOX1O00570 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX1O00570 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.8□□□□□ -1.32
SOX1O00570 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX1O00570 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
SOX1O00570 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 AC092326.2-201ENST00000624772 1561 ntBASIC6.79□□□□□ -1.32
SOX1O00570 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
SOX1O00570 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 AC135352.1-201ENST00000506173 1418 ntBASIC6.79□□□□□ -1.32
SOX1O00570 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.79□□□□□ -1.32
SOX1O00570 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 RNU5F-7P-201ENST00000363696 115 ntBASIC6.79□□□□□ -1.32
SOX1O00570 RNU6-501P-201ENST00000364072 100 ntBASIC6.79□□□□□ -1.32
SOX1O00570 RNU6-374P-201ENST00000364146 108 ntBASIC6.79□□□□□ -1.32
SOX1O00570 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SOX1O00570 MIR1286-201ENST00000408112 78 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC013404.1-201ENST00000413068 249 ntBASIC6.79□□□□□ -1.32
SOX1O00570 RPL23AP27-201ENST00000415161 451 ntBASIC6.79□□□□□ -1.32
SOX1O00570 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 BTF3P10-201ENST00000433415 495 ntBASIC6.79□□□□□ -1.32
SOX1O00570 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 PA2G4P6-201ENST00000438325 1197 ntBASIC6.79□□□□□ -1.32
SOX1O00570 RPS12P17-201ENST00000438591 377 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 AL772161.1-201ENST00000439130 476 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms