Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL357094.1-201ENST00000603845 844 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC000068.2-201ENST00000608816 460 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL139407.1-201ENST00000613826 1175 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 FRG1DP-201ENST00000635586 771 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC020633.1-201ENST00000468439 2247 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 SPATA2P1-201ENST00000431223 2055 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PROS2P-201ENST00000474651 1951 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 RNA5SP335-201ENST00000363817 110 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 SNORA67-201ENST00000384423 137 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 GAPDHP15-201ENST00000398586 975 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 EI24P3-201ENST00000399046 1062 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 RNU2-22P-201ENST00000411266 212 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 USP12PY-201ENST00000427677 1064 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 NPM1P22-201ENST00000427761 952 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 MTND2P2-201ENST00000434633 945 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 MTCYBP12-201ENST00000440559 1134 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 MOB1AP2-201ENST00000446060 614 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC098826.2-201ENST00000452011 651 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AL049874.2-201ENST00000492636 288 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 PGAM1P13-201ENST00000507497 754 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 IGHV3-63-201ENST00000518422 341 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 HMGB1P40-201ENST00000525121 540 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC126177.5-201ENST00000549599 178 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC025918.2-201ENST00000558683 763 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 RN7SL339P-201ENST00000580597 296 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 CBX3P2-202ENST00000583365 535 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC023762.1-201ENST00000603280 584 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC108738.1-201ENST00000603703 237 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC006946.3-201ENST00000609791 756 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC126915.2-201ENST00000610957 190 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC009163.6-201ENST00000612367 342 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC068880.4-201ENST00000623082 495 ntBASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKIPSDQ9NZQ3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 AC003973.3-201ENST00000624863 2822 ntBASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 ZNF90P1-201ENST00000480493 1951 ntBASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
NCKIPSDQ9NZQ3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC104260.2-201ENST00000623551 3497 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 RNU1-77P-201ENST00000390868 162 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 RNA5SP339-201ENST00000390987 122 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 RNU6-1000P-201ENST00000391066 106 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms