Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC4O75487 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.2□□□□□ -1.58
GPC4O75487 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 AC005294.1-201ENST00000355509 281 ntBASIC5.19□□□□□ -1.58
GPC4O75487 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
GPC4O75487 RNU1-149P-201ENST00000390870 161 ntBASIC5.19□□□□□ -1.58
GPC4O75487 RNU6-1176P-201ENST00000390955 107 ntBASIC5.19□□□□□ -1.58
GPC4O75487 TAF9BP2-201ENST00000400856 499 ntBASIC5.19□□□□□ -1.58
GPC4O75487 ATP5F1P6-201ENST00000402768 767 ntBASIC5.19□□□□□ -1.58
GPC4O75487 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 MTCO2P1-201ENST00000424648 477 ntBASIC5.19□□□□□ -1.58
GPC4O75487 UBE2D3P3-201ENST00000426992 425 ntBASIC5.19□□□□□ -1.58
GPC4O75487 FAM96AP1-201ENST00000430879 482 ntBASIC5.19□□□□□ -1.58
GPC4O75487 SDR42E1P3-201ENST00000438345 502 ntBASIC5.19□□□□□ -1.58
GPC4O75487 NPM1P33-201ENST00000438918 872 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 NPM1P17-201ENST00000479221 602 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC116562.1-201ENST00000485355 781 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC092902.1-201ENST00000486999 259 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC104629.1-201ENST00000494226 508 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC024558.1-201ENST00000505008 528 ntBASIC5.19□□□□□ -1.58
GPC4O75487 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.19□□□□□ -1.58
GPC4O75487 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 AC114947.2-201ENST00000565748 2125 ntBASIC5.19□□□□□ -1.58
GPC4O75487 CBX3P2-202ENST00000583365 535 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC4O75487 AC012557.1-201ENST00000607115 611 ntBASIC5.19□□□□□ -1.58
GPC4O75487 AC022467.1-201ENST00000614738 749 ntBASIC5.19□□□□□ -1.58
GPC4O75487 MIR6839-201ENST00000620425 113 ntBASIC5.19□□□□□ -1.58
GPC4O75487 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC4O75487 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC4O75487 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 SPATA2P1-201ENST00000431223 2055 ntBASIC5.19□□□□□ -1.58
GPC4O75487 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC4O75487 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC4O75487 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC4O75487 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
GPC4O75487 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
GPC4O75487 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GPC4O75487 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 SNORA67-201ENST00000384423 137 ntBASIC5.18□□□□□ -1.58
GPC4O75487 RNU6-244P-201ENST00000391028 104 ntBASIC5.18□□□□□ -1.58
GPC4O75487 GTF3AP1-201ENST00000416942 1004 ntBASIC5.18□□□□□ -1.58
GPC4O75487 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GPC4O75487 RPL7P41-201ENST00000485823 957 ntBASIC5.18□□□□□ -1.58
GPC4O75487 RPS21P4-201ENST00000487122 248 ntBASIC5.18□□□□□ -1.58
GPC4O75487 NIFKP7-201ENST00000503365 834 ntBASIC5.18□□□□□ -1.58
GPC4O75487 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC4O75487 AL049779.2-201ENST00000553847 315 ntBASIC5.18□□□□□ -1.58
GPC4O75487 AC025918.2-201ENST00000558683 763 ntBASIC5.18□□□□□ -1.58
GPC4O75487 AC022884.2-201ENST00000578535 580 ntBASIC5.18□□□□□ -1.58
GPC4O75487 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
GPC4O75487 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms