RNA–Protein interactions for RNA: ENST00000426992.2

UBE2D3P3-201, Transcript of ubiquitin conjugating enzyme E2 D3 pseudogene 3, humanhuman

BASIC

Gene UBE2D3P3, Length 425 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P3-201ENST00000426992 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
UBE2D3P3-201ENST00000426992 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
UBE2D3P3-201ENST00000426992 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
UBE2D3P3-201ENST00000426992 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
UBE2D3P3-201ENST00000426992 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
UBE2D3P3-201ENST00000426992 FOXD1Q16676 465 aa20.25■□□□□ 0.83
UBE2D3P3-201ENST00000426992 ADRA2BP18089 450 aa19.71■□□□□ 0.75
UBE2D3P3-201ENST00000426992 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
UBE2D3P3-201ENST00000426992 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
UBE2D3P3-201ENST00000426992 MSH5O43196 834 aa18.57■□□□□ 0.56
UBE2D3P3-201ENST00000426992 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
UBE2D3P3-201ENST00000426992 KCNA4P22459 653 aa18.23■□□□□ 0.51
UBE2D3P3-201ENST00000426992 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
UBE2D3P3-201ENST00000426992 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
UBE2D3P3-201ENST00000426992 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
UBE2D3P3-201ENST00000426992 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
UBE2D3P3-201ENST00000426992 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
UBE2D3P3-201ENST00000426992 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
UBE2D3P3-201ENST00000426992 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
UBE2D3P3-201ENST00000426992 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3P3-201ENST00000426992 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
UBE2D3P3-201ENST00000426992 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3P3-201ENST00000426992 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
UBE2D3P3-201ENST00000426992 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
UBE2D3P3-201ENST00000426992 ZBTB22O15209 634 aa16.78■□□□□ 0.28
UBE2D3P3-201ENST00000426992 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
UBE2D3P3-201ENST00000426992 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
UBE2D3P3-201ENST00000426992 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
UBE2D3P3-201ENST00000426992 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
UBE2D3P3-201ENST00000426992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.23
UBE2D3P3-201ENST00000426992 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3P3-201ENST00000426992 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3P3-201ENST00000426992 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
UBE2D3P3-201ENST00000426992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
UBE2D3P3-201ENST00000426992 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
UBE2D3P3-201ENST00000426992 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3P3-201ENST00000426992 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
UBE2D3P3-201ENST00000426992 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3P3-201ENST00000426992 APLP2Q06481 763 aa15.85■□□□□ 0.13
UBE2D3P3-201ENST00000426992 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
UBE2D3P3-201ENST00000426992 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
UBE2D3P3-201ENST00000426992 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3P3-201ENST00000426992 CAPN15O75808 1086 aa15.61■□□□□ 0.09
UBE2D3P3-201ENST00000426992 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
UBE2D3P3-201ENST00000426992 POLA2Q14181 598 aa15.39■□□□□ 0.05
UBE2D3P3-201ENST00000426992 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3P3-201ENST00000426992 ABCB7O75027 752 aa15.35■□□□□ 0.05
UBE2D3P3-201ENST00000426992 FKBP8Q14318 412 aa15.29■□□□□ 0.04
UBE2D3P3-201ENST00000426992 DSG3P32926 999 aa15.26■□□□□ 0.03
UBE2D3P3-201ENST00000426992 FBLN2P98095 1184 aa15.22■□□□□ 0.03
UBE2D3P3-201ENST00000426992 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
UBE2D3P3-201ENST00000426992 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
UBE2D3P3-201ENST00000426992 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
UBE2D3P3-201ENST00000426992 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
UBE2D3P3-201ENST00000426992 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
UBE2D3P3-201ENST00000426992 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
UBE2D3P3-201ENST00000426992 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
UBE2D3P3-201ENST00000426992 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3P3-201ENST00000426992 PROM2Q8N271 834 aa14.75□□□□□ -0.05
UBE2D3P3-201ENST00000426992 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
UBE2D3P3-201ENST00000426992 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
UBE2D3P3-201ENST00000426992 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBE2D3P3-201ENST00000426992 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
UBE2D3P3-201ENST00000426992 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
UBE2D3P3-201ENST00000426992 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
UBE2D3P3-201ENST00000426992 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
UBE2D3P3-201ENST00000426992 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3P3-201ENST00000426992 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
UBE2D3P3-201ENST00000426992 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3P3-201ENST00000426992 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3P3-201ENST00000426992 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3P3-201ENST00000426992 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
UBE2D3P3-201ENST00000426992 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
UBE2D3P3-201ENST00000426992 MIER1Q8N108 512 aa14.22□□□□□ -0.13
UBE2D3P3-201ENST00000426992 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
UBE2D3P3-201ENST00000426992 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
UBE2D3P3-201ENST00000426992 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
UBE2D3P3-201ENST00000426992 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
UBE2D3P3-201ENST00000426992 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
UBE2D3P3-201ENST00000426992 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3P3-201ENST00000426992 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
UBE2D3P3-201ENST00000426992 PKD2Q13563 968 aa13.89□□□□□ -0.19
UBE2D3P3-201ENST00000426992 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3P3-201ENST00000426992 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
UBE2D3P3-201ENST00000426992 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
UBE2D3P3-201ENST00000426992 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3P3-201ENST00000426992 NUBP1P53384 320 aa13.8□□□□□ -0.2
UBE2D3P3-201ENST00000426992 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3P3-201ENST00000426992 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE2D3P3-201ENST00000426992 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
UBE2D3P3-201ENST00000426992 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE2D3P3-201ENST00000426992 GSE1Q14687 1217 aa13.74□□□□□ -0.21
UBE2D3P3-201ENST00000426992 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
UBE2D3P3-201ENST00000426992 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
UBE2D3P3-201ENST00000426992 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
UBE2D3P3-201ENST00000426992 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3P3-201ENST00000426992 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
UBE2D3P3-201ENST00000426992 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
UBE2D3P3-201ENST00000426992 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
UBE2D3P3-201ENST00000426992 RGL2O15211 777 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms