Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 SOX15-203ENST00000570788 1093 ntBASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DRB4X5D2U9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 AC116351.2-201ENST00000606540 1585 ntBASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DRB4X5D2U9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
HLA-DRB4X5D2U9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 AC018553.1-201ENST00000616682 1458 ntBASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 RPS2P52-201ENST00000469610 820 ntBASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms