Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 AL359736.2-201ENST00000621992 437 ntBASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX49Q9Y6V7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX49Q9Y6V7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 MIR2861-201ENST00000636310 90 ntBASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX49Q9Y6V7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.33■■□□□ 1.32
DDX49Q9Y6V7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX49Q9Y6V7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX49Q9Y6V7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.33■■□□□ 1.32
DDX49Q9Y6V7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX49Q9Y6V7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 AC093503.3-201ENST00000624917 2352 ntBASIC23.32■■□□□ 1.32
DDX49Q9Y6V7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 RPS2P4-201ENST00000476944 856 ntBASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms