Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC083906.2-201ENST00000511578 360 ntBASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 TEX21P-204ENST00000641479 1693 ntBASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 AL121832.2-201ENST00000610979 668 ntBASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 AC092118.2-201ENST00000613495 667 ntBASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 AC006557.6-201ENST00000623071 864 ntBASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHA3Q9Y5H8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 AC124283.5-201ENST00000624661 1809 ntBASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 AC091874.3-201ENST00000512672 1195 ntBASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHA3Q9Y5H8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 RPS2P52-201ENST00000469610 820 ntBASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PCDHA3Q9Y5H8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDHA3Q9Y5H8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms