Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 UNC93B2-201ENST00000285383 730 ntBASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 AP000525.1-201ENST00000608286 694 ntBASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 AL445675.2-201ENST00000620291 557 ntBASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHB2Q9Y5E7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 AL031985.4-201ENST00000642138 673 ntBASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB2Q9Y5E7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 KRT18P21-201ENST00000515767 1272 ntBASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB2Q9Y5E7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 MIR1238-201ENST00000408483 83 ntBASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 KRT8P9-201ENST00000558927 1449 ntBASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB2Q9Y5E7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB2Q9Y5E7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHB2Q9Y5E7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHB2Q9Y5E7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHB2Q9Y5E7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHB2Q9Y5E7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms