Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 TMEM179-206ENST00000616017 1645 ntBASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB9Q9Y5E1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB9Q9Y5E1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB9Q9Y5E1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 AL353708.3-201ENST00000610272 989 ntBASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB9Q9Y5E1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 AIRN-201ENST00000601203 4374 ntBASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 YBX1P10-201ENST00000444752 975 ntBASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 AC004264.1-201ENST00000608354 794 ntBASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB9Q9Y5E1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms