Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GNEQ9Y223 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.78■■□□□ 1.08
GNEQ9Y223 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.78■■□□□ 1.08
GNEQ9Y223 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GNEQ9Y223 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GNEQ9Y223 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GNEQ9Y223 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GNEQ9Y223 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.78■■□□□ 1.08
GNEQ9Y223 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.77■■□□□ 1.08
GNEQ9Y223 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 LINC01465-201ENST00000408887 1940 ntBASIC21.77■■□□□ 1.08
GNEQ9Y223 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.77■■□□□ 1.08
GNEQ9Y223 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
GNEQ9Y223 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.77■■□□□ 1.08
GNEQ9Y223 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.77■■□□□ 1.08
GNEQ9Y223 CA15P1-201ENST00000481698 905 ntBASIC21.77■■□□□ 1.08
GNEQ9Y223 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.77■■□□□ 1.08
GNEQ9Y223 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.77■■□□□ 1.08
GNEQ9Y223 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.77■■□□□ 1.08
GNEQ9Y223 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.77■■□□□ 1.08
GNEQ9Y223 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.77■■□□□ 1.08
GNEQ9Y223 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GNEQ9Y223 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
GNEQ9Y223 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
GNEQ9Y223 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
GNEQ9Y223 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GNEQ9Y223 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
GNEQ9Y223 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GNEQ9Y223 KRT8P41-201ENST00000533985 1514 ntBASIC21.76■■□□□ 1.07
GNEQ9Y223 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
GNEQ9Y223 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
GNEQ9Y223 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.76■■□□□ 1.07
GNEQ9Y223 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
GNEQ9Y223 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.76■■□□□ 1.07
GNEQ9Y223 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.76■■□□□ 1.07
GNEQ9Y223 AC011558.1-201ENST00000623459 338 ntBASIC21.76■■□□□ 1.07
GNEQ9Y223 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GNEQ9Y223 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GNEQ9Y223 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GNEQ9Y223 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GNEQ9Y223 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GNEQ9Y223 UPK3BP1-201ENST00000428678 509 ntBASIC21.75■■□□□ 1.07
GNEQ9Y223 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.75■■□□□ 1.07
GNEQ9Y223 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GNEQ9Y223 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.75■■□□□ 1.07
GNEQ9Y223 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.75■■□□□ 1.07
GNEQ9Y223 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.74■■□□□ 1.07
GNEQ9Y223 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.74■■□□□ 1.07
GNEQ9Y223 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.74■■□□□ 1.07
GNEQ9Y223 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.74■■□□□ 1.07
GNEQ9Y223 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.74■■□□□ 1.07
GNEQ9Y223 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.74■■□□□ 1.07
GNEQ9Y223 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.74■■□□□ 1.07
GNEQ9Y223 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GNEQ9Y223 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
GNEQ9Y223 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 AC020907.5-201ENST00000624372 1936 ntBASIC21.73■■□□□ 1.07
GNEQ9Y223 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.73■■□□□ 1.07
GNEQ9Y223 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.73■■□□□ 1.07
GNEQ9Y223 CKBP1-201ENST00000565489 1086 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms