Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 AC007322.1-201ENST00000426983 750 ntBASIC17.36■□□□□ 0.37
COPS3Q9UNS2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPS3Q9UNS2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 OR10C1-204ENST00000622521 1039 ntBASIC17.35■□□□□ 0.37
COPS3Q9UNS2 AC120498.9-201ENST00000339021 3867 ntBASIC17.35■□□□□ 0.37
COPS3Q9UNS2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 AC018553.1-201ENST00000616682 1458 ntBASIC17.35■□□□□ 0.37
COPS3Q9UNS2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COPS3Q9UNS2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 AC026271.2-201ENST00000428091 497 ntBASIC17.34■□□□□ 0.37
COPS3Q9UNS2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COPS3Q9UNS2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
COPS3Q9UNS2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS3Q9UNS2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms