Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA4Q9UN74 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 UBE2SP1-201ENST00000450587 669 ntBASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 HTR7P1-201ENST00000538670 1336 ntBASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA4Q9UN74 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 RARRES2P10-201ENST00000564312 460 ntBASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA4Q9UN74 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 HLA-A-209ENST00000638375 975 ntBASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms