Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NOTCH3Q9UM47 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NOTCH3Q9UM47 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 AC244015.2-201ENST00000616358 1861 ntBASIC15.02■□□□□ -0
NOTCH3Q9UM47 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.02■□□□□ -0
NOTCH3Q9UM47 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
NOTCH3Q9UM47 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.02□□□□□ -0.01
NOTCH3Q9UM47 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 AL137013.1-201ENST00000432946 1228 ntBASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 AC091076.1-201ENST00000610741 619 ntBASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 AC090340.1-201ENST00000620778 4980 ntBASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NOTCH3Q9UM47 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms