Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
NPC1L1Q9UHC9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NPC1L1Q9UHC9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NPC1L1Q9UHC9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.35■■□□□ 1.81
NPC1L1Q9UHC9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NPC1L1Q9UHC9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 AL596275.1-201ENST00000423464 877 ntBASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 AL031985.4-201ENST00000642138 673 ntBASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 AFG3L1P-217ENST00000557444 2447 ntBASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1L1Q9UHC9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 SNORA78-201ENST00000459373 127 ntBASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1L1Q9UHC9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.33■■□□□ 1.8
NPC1L1Q9UHC9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.33■■□□□ 1.8
NPC1L1Q9UHC9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.33■■□□□ 1.8
NPC1L1Q9UHC9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.33■■□□□ 1.8
NPC1L1Q9UHC9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 AL158211.5-201ENST00000623583 2518 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 RCC2P6-201ENST00000526625 1557 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 TSPY7P-201ENST00000431358 1114 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 B3GAT3P1-201ENST00000471720 806 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 MIR4785-201ENST00000585005 73 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 AC026471.5-201ENST00000615068 467 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 AC131212.4-201ENST00000623606 975 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 CR392000.1-201ENST00000624770 1228 ntBASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1L1Q9UHC9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1L1Q9UHC9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 REXO1L10P-201ENST00000615707 1290 ntBASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 REXO1L12P-201ENST00000622156 912 ntBASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.3■■□□□ 1.8
NPC1L1Q9UHC9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 LINC01465-201ENST00000408887 1940 ntBASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 DGCR10-201ENST00000609839 495 ntBASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.29■■□□□ 1.8
NPC1L1Q9UHC9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms