Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 MIR6084-201ENST00000622012 110 ntBASIC16.59■□□□□ 0.25
COMMD9Q9P000 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.59■□□□□ 0.25
COMMD9Q9P000 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD9Q9P000 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD9Q9P000 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD9Q9P000 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
COMMD9Q9P000 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD9Q9P000 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.58■□□□□ 0.25
COMMD9Q9P000 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
COMMD9Q9P000 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COMMD9Q9P000 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
COMMD9Q9P000 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 AC027612.3-201ENST00000413684 1047 ntBASIC16.58■□□□□ 0.24
COMMD9Q9P000 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 AC142381.2-201ENST00000566120 298 ntBASIC16.58■□□□□ 0.24
COMMD9Q9P000 AL139246.5-201ENST00000606645 996 ntBASIC16.58■□□□□ 0.24
COMMD9Q9P000 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 AC020916.1-201ENST00000587762 1774 ntBASIC16.58■□□□□ 0.24
COMMD9Q9P000 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
COMMD9Q9P000 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD9Q9P000 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 IRS3P-201ENST00000223076 1006 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L2-201ENST00000561772 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L6-201ENST00000626483 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L1-201ENST00000627662 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L8-201ENST00000629013 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L3-201ENST00000630187 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L7-201ENST00000630678 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 DUX4L5-201ENST00000630834 1275 ntBASIC16.57■□□□□ 0.24
COMMD9Q9P000 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms