Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF38Q9NXL2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF38Q9NXL2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF38Q9NXL2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 UBE2SP1-201ENST00000450587 669 ntBASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF38Q9NXL2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF38Q9NXL2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF38Q9NXL2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARHGEF38Q9NXL2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 TREX1-205ENST00000625293 1783 ntBASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 KRT8P8-201ENST00000434750 1448 ntBASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF38Q9NXL2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms