Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.71■■□□□ 1.23
EFCC1Q9HA90 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.71■■□□□ 1.23
EFCC1Q9HA90 AL691432.3-201ENST00000621860 400 ntBASIC22.71■■□□□ 1.23
EFCC1Q9HA90 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 AC116562.4-202ENST00000641738 218 ntBASIC22.71■■□□□ 1.23
EFCC1Q9HA90 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
EFCC1Q9HA90 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
EFCC1Q9HA90 AC005229.4-201ENST00000610085 2198 ntBASIC22.7■■□□□ 1.23
EFCC1Q9HA90 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
EFCC1Q9HA90 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
EFCC1Q9HA90 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EFCC1Q9HA90 FEM1AP4-201ENST00000443167 1987 ntBASIC22.69■■□□□ 1.22
EFCC1Q9HA90 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.68■■□□□ 1.22
EFCC1Q9HA90 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 AC004980.1-204ENST00000429707 299 ntBASIC22.67■■□□□ 1.22
EFCC1Q9HA90 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 AC011558.1-201ENST00000623459 338 ntBASIC22.67■■□□□ 1.22
EFCC1Q9HA90 AC131212.4-201ENST00000623606 975 ntBASIC22.67■■□□□ 1.22
EFCC1Q9HA90 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EFCC1Q9HA90 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 CCR12P-201ENST00000446203 998 ntBASIC22.66■■□□□ 1.22
EFCC1Q9HA90 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EFCC1Q9HA90 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms