Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.37■■□□□ 1.01
HIPK3Q9H422 AC008622.2-201ENST00000617006 1229 ntBASIC21.37■■□□□ 1.01
HIPK3Q9H422 AC116407.4-201ENST00000623319 1061 ntBASIC21.37■■□□□ 1.01
HIPK3Q9H422 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 AC006128.1-201ENST00000624704 1661 ntBASIC21.37■■□□□ 1.01
HIPK3Q9H422 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIPK3Q9H422 AC007225.1-201ENST00000566331 1836 ntBASIC21.36■■□□□ 1.01
HIPK3Q9H422 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 PRSS44-201ENST00000515154 1146 ntBASIC21.36■■□□□ 1.01
HIPK3Q9H422 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 AC069148.1-201ENST00000608741 768 ntBASIC21.36■■□□□ 1.01
HIPK3Q9H422 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HIPK3Q9H422 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIPK3Q9H422 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.35■■□□□ 1.01
HIPK3Q9H422 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.35■■□□□ 1.01
HIPK3Q9H422 CLEC4GP1-201ENST00000596555 870 ntBASIC21.35■■□□□ 1.01
HIPK3Q9H422 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.35■■□□□ 1.01
HIPK3Q9H422 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIPK3Q9H422 AF106564.1-201ENST00000607058 2553 ntBASIC21.35■■□□□ 1.01
HIPK3Q9H422 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 KRT18P38-201ENST00000449496 1282 ntBASIC21.34■■□□□ 1.01
HIPK3Q9H422 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 AL160286.2-201ENST00000567150 934 ntBASIC21.34■■□□□ 1.01
HIPK3Q9H422 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.34■■□□□ 1.01
HIPK3Q9H422 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HIPK3Q9H422 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIPK3Q9H422 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIPK3Q9H422 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 VENTXP5-201ENST00000523979 775 ntBASIC21.33■■□□□ 1.01
HIPK3Q9H422 AP003041.3-201ENST00000527151 707 ntBASIC21.33■■□□□ 1.01
HIPK3Q9H422 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.33■■□□□ 1.01
HIPK3Q9H422 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HIPK3Q9H422 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.33■■□□□ 1
HIPK3Q9H422 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
HIPK3Q9H422 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.32■■□□□ 1
HIPK3Q9H422 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIPK3Q9H422 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HIPK3Q9H422 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.32■■□□□ 1
HIPK3Q9H422 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms