Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 AC104771.1-201ENST00000603335 964 ntBASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 AC069152.1-201ENST00000438030 544 ntBASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC68Q9H2F9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC68Q9H2F9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 PNMA6B-201ENST00000538162 1200 ntBASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 AC098934.4-201ENST00000564127 592 ntBASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC68Q9H2F9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC116562.4-201ENST00000641316 2276 ntBASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 RPS2P52-201ENST00000469610 820 ntBASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC68Q9H2F9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC68Q9H2F9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC68Q9H2F9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC68Q9H2F9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC68Q9H2F9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms