Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 SPDYE13P-201ENST00000445314 798 ntBASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 TSPY17P-201ENST00000450329 467 ntBASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 POLD2P1-201ENST00000511220 997 ntBASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 AL121772.3-201ENST00000610840 674 ntBASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.58■□□□□ 0.57
CNTNAP3Q9BZ76 IL9RP2-201ENST00000423948 1312 ntBASIC18.58■□□□□ 0.57
CNTNAP3Q9BZ76 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3Q9BZ76 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3Q9BZ76 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3Q9BZ76 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 TSPY12P-201ENST00000421279 868 ntBASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 AL353719.1-201ENST00000566847 864 ntBASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 AL023803.3-201ENST00000615559 522 ntBASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 AC011298.2-201ENST00000617989 482 ntBASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 AL137060.1-201ENST00000618151 2648 ntBASIC18.58■□□□□ 0.56
CNTNAP3Q9BZ76 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AC096733.2-201ENST00000609937 1394 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 STARP1-201ENST00000397973 869 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AP002383.4-201ENST00000442518 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 YBX1P10-201ENST00000444752 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 BX276092.5-203ENST00000456199 560 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 SLC25A1P1-201ENST00000528351 927 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AL121912.1-201ENST00000603683 238 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 AL390719.2-201ENST00000606993 987 ntBASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3Q9BZ76 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 AC016734.2-201ENST00000624325 1377 ntBASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 HTR5BP-201ENST00000430851 1154 ntBASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 AL121672.3-201ENST00000608644 468 ntBASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms