Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC023632.3-201ENST00000521633 145 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC013268.1-206ENST00000638368 961 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC112229.1-201ENST00000639295 961 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC018553.1-201ENST00000616682 1458 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC068338.2-201ENST00000563278 1430 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC090164.3-201ENST00000610780 2143 ntBASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AR-207ENST00000612010 3896 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AL355472.2-201ENST00000422958 438 ntBASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 CNN2P6-201ENST00000439038 900 ntBASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 BICD1-207ENST00000551848 1962 ntBASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 HCG24-202ENST00000414398 717 ntTSL 3 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 C2orf69P4-201ENST00000565394 541 ntBASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 CYP2T3P-201ENST00000601990 817 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms