Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.99■□□□□ 0.63
PKP4Q99569 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 ABHD17AP1-201ENST00000358206 933 ntBASIC18.99■□□□□ 0.63
PKP4Q99569 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PKP4Q99569 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.99■□□□□ 0.63
PKP4Q99569 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 TUBB8P6-201ENST00000436895 1288 ntBASIC18.99■□□□□ 0.63
PKP4Q99569 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 C1QBPP2-201ENST00000528754 825 ntBASIC18.99■□□□□ 0.63
PKP4Q99569 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.99■□□□□ 0.63
PKP4Q99569 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.99■□□□□ 0.63
PKP4Q99569 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
PKP4Q99569 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
PKP4Q99569 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PKP4Q99569 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PKP4Q99569 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 PRORSD1P-201ENST00000295112 541 ntBASIC18.98■□□□□ 0.63
PKP4Q99569 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.98■□□□□ 0.63
PKP4Q99569 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.98■□□□□ 0.63
PKP4Q99569 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.98■□□□□ 0.63
PKP4Q99569 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.98■□□□□ 0.63
PKP4Q99569 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP4Q99569 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP4Q99569 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.97■□□□□ 0.63
PKP4Q99569 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PKP4Q99569 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
PKP4Q99569 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PKP4Q99569 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.97■□□□□ 0.63
PKP4Q99569 AC133681.1-201ENST00000465482 601 ntBASIC18.97■□□□□ 0.63
PKP4Q99569 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PKP4Q99569 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.97■□□□□ 0.63
PKP4Q99569 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 KRT8P8-201ENST00000434750 1448 ntBASIC18.97■□□□□ 0.63
PKP4Q99569 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.97■□□□□ 0.63
PKP4Q99569 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PKP4Q99569 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP4Q99569 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PKP4Q99569 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PKP4Q99569 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.96■□□□□ 0.63
PKP4Q99569 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PKP4Q99569 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP4Q99569 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PKP4Q99569 RPPH1-201ENST00000516869 333 ntBASIC18.96■□□□□ 0.63
PKP4Q99569 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.96■□□□□ 0.63
PKP4Q99569 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PKP4Q99569 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PKP4Q99569 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP4Q99569 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP4Q99569 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.96■□□□□ 0.62
PKP4Q99569 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PKP4Q99569 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.95■□□□□ 0.62
PKP4Q99569 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP4Q99569 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms