Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 MIR3181-201ENST00000578512 73 ntBASIC18.35■□□□□ 0.53
NR1H4Q96RI1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 AC124067.4-201ENST00000519691 2379 ntBASIC18.35■□□□□ 0.53
NR1H4Q96RI1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 ABALON-201ENST00000629058 1903 ntBASIC18.35■□□□□ 0.53
NR1H4Q96RI1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 HTR7P1-202ENST00000624664 4411 ntBASIC18.34■□□□□ 0.53
NR1H4Q96RI1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 TNRC18P3-201ENST00000441896 2691 ntBASIC18.34■□□□□ 0.53
NR1H4Q96RI1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H4Q96RI1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H4Q96RI1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.33■□□□□ 0.52
NR1H4Q96RI1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms