Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 KRT8P8-201ENST00000434750 1448 ntBASIC23.09■■□□□ 1.29
NEK1Q96PY6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.09■■□□□ 1.29
NEK1Q96PY6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEK1Q96PY6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 TUBB8P6-201ENST00000436895 1288 ntBASIC23.08■■□□□ 1.29
NEK1Q96PY6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.08■■□□□ 1.29
NEK1Q96PY6 AL032819.2-201ENST00000624543 2162 ntBASIC23.08■■□□□ 1.29
NEK1Q96PY6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NEK1Q96PY6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NEK1Q96PY6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
NEK1Q96PY6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 TSPY20P-201ENST00000450910 630 ntBASIC23.07■■□□□ 1.28
NEK1Q96PY6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 MIR4651-201ENST00000582622 73 ntBASIC23.07■■□□□ 1.28
NEK1Q96PY6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 AC066615.1-201ENST00000640911 628 ntBASIC23.07■■□□□ 1.28
NEK1Q96PY6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.07■■□□□ 1.28
NEK1Q96PY6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEK1Q96PY6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NEK1Q96PY6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NEK1Q96PY6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
NEK1Q96PY6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 NBPF21P-201ENST00000425093 1451 ntBASIC23.05■■□□□ 1.28
NEK1Q96PY6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 ZNF815P-204ENST00000434898 1737 ntBASIC23.05■■□□□ 1.28
NEK1Q96PY6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms