Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GAFA1Q96PS6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GAFA1Q96PS6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 HTR7P1-201ENST00000538670 1336 ntBASIC16.21■□□□□ 0.19
GAFA1Q96PS6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms