Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX27Q96L92 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SNX27Q96L92 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX27Q96L92 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.08■□□□□ 0.97
SNX27Q96L92 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX27Q96L92 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNX27Q96L92 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.08■□□□□ 0.97
SNX27Q96L92 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.08■□□□□ 0.97
SNX27Q96L92 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.08■□□□□ 0.97
SNX27Q96L92 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.08■□□□□ 0.97
SNX27Q96L92 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.08■□□□□ 0.96
SNX27Q96L92 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SNX27Q96L92 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SNX27Q96L92 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX27Q96L92 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX27Q96L92 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.08■□□□□ 0.96
SNX27Q96L92 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
SNX27Q96L92 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 AC079598.2-202ENST00000546624 1451 ntBASIC21.07■□□□□ 0.96
SNX27Q96L92 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 AC026396.1-201ENST00000419388 421 ntBASIC21.07■□□□□ 0.96
SNX27Q96L92 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX27Q96L92 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX27Q96L92 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.07■□□□□ 0.96
SNX27Q96L92 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX27Q96L92 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX27Q96L92 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.07■□□□□ 0.96
SNX27Q96L92 AC131212.4-201ENST00000623606 975 ntBASIC21.07■□□□□ 0.96
SNX27Q96L92 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX27Q96L92 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX27Q96L92 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.06■□□□□ 0.96
SNX27Q96L92 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX27Q96L92 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX27Q96L92 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SNX27Q96L92 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 B3GAT3P1-201ENST00000471720 806 ntBASIC21.06■□□□□ 0.96
SNX27Q96L92 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SNX27Q96L92 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.06■□□□□ 0.96
SNX27Q96L92 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX27Q96L92 MIR6786-201ENST00000616843 113 ntBASIC21.06■□□□□ 0.96
SNX27Q96L92 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX27Q96L92 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SNX27Q96L92 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX27Q96L92 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SNX27Q96L92 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SNX27Q96L92 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX27Q96L92 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX27Q96L92 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX27Q96L92 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SNX27Q96L92 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNX27Q96L92 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX27Q96L92 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX27Q96L92 UNC93B2-201ENST00000285383 730 ntBASIC21.05■□□□□ 0.96
SNX27Q96L92 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX27Q96L92 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX27Q96L92 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX27Q96L92 AP000525.1-201ENST00000608286 694 ntBASIC21.05■□□□□ 0.96
SNX27Q96L92 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX27Q96L92 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX27Q96L92 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX27Q96L92 FSCN1P1-201ENST00000568912 1481 ntBASIC21.05■□□□□ 0.96
SNX27Q96L92 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNX27Q96L92 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.04■□□□□ 0.96
SNX27Q96L92 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SNX27Q96L92 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SNX27Q96L92 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX27Q96L92 AC011506.1-201ENST00000474329 610 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms